RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 KBTBD6Q86V97 674 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 ARHGEF19Q8IW93 802 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 CPXM2Q8N436 756 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 RNF139Q8WU17 664 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 KAT5Q92993 513 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 INTS2Q9H0H0 1204 aaKnown RBP25.37■■□□□ 1.65
HLA-C-209ENST00000495835 HBS1LQ9Y450 684 aaKnown RBP25.37■■□□□ 1.65
HLA-C-209ENST00000495835 DNAH14Q0VDD8 3507 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 SGK1O00141 431 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 CORO1AP31146 461 aaKnown RBP25.36■■□□□ 1.65
HLA-C-209ENST00000495835 DAOAP59103 153 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 ELF2Q15723 593 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 RSPO4Q2I0M5 234 aaPredicted RBP25.36■■□□□ 1.65
HLA-C-209ENST00000495835 C10orf76Q5T2E6 689 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 BSPRYQ5W0U4 402 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 TMEM92Q6UXU6 159 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 SFTPA1Q8IWL2 248 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 ZNF513Q8N8E2 541 aaPredicted RBP25.36■■□□□ 1.65
HLA-C-209ENST00000495835 CLSTN2Q9H4D0 955 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 AGO1Q9UL18 857 aaKnown RBP25.36■■□□□ 1.65
HLA-C-209ENST00000495835 SLC27A6Q9Y2P4 619 aa25.36■■□□□ 1.65
HLA-C-209ENST00000495835 SLC12A8A0AV02 714 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 GTPBP10A4D1E9 387 aaKnown RBP25.35■■□□□ 1.65
HLA-C-209ENST00000495835 FBXO21O94952 628 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 PENKP01210 267 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-209ENST00000495835 DGKGP49619 791 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 E2F5Q15329 346 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 TRIP4Q15650 581 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-209ENST00000495835 FAM217AQ8IXS0 508 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 OLIG1Q8TAK6 271 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 KREMEN1Q96MU8 473 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 DUSP15Q9H1R2 295 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-209ENST00000495835 CACNA1AO00555 2505 aa25.35■■□□□ 1.65
HLA-C-209ENST00000495835 ANTXRLA6NF34 631 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 YJEFN3A6XGL0 299 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 E7ENQ6 273 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 ADAM23O75077 832 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 LATS1O95835 1130 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 CYBBP04839 570 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 CISD3P0C7P0 127 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 ZNF806P0C7X5 589 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 NTSR1P30989 418 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 HARS2P49590 506 aaKnown RBP25.34■■□□□ 1.65
HLA-C-209ENST00000495835 MFAP3P55082 362 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 ZNF445P59923 1031 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 BYSLQ13895 437 aaKnown RBP25.34■■□□□ 1.65
HLA-C-209ENST00000495835 SDE2Q6IQ49 451 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 ANO7Q6IWH7 933 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 PMF1Q6P1K2 205 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 PRR23CQ6ZRP0 262 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 MDGA1Q8NFP4 955 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 ZSWIM1Q9BR11 485 aa25.34■■□□□ 1.65
HLA-C-209ENST00000495835 UBE2TQ9NPD8 197 aaPredicted RBP25.34■■□□□ 1.65
HLA-C-209ENST00000495835 M0QYV0 167 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 GFRA2O00451 464 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 NPC1O15118 1278 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 MED7O43513 233 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 BRD2P25440 801 aaKnown RBP25.33■■□□□ 1.65
HLA-C-209ENST00000495835 RPL34P49207 117 aaKnown RBP25.33■■□□□ 1.65
HLA-C-209ENST00000495835 CT47A1Q5JQC4 288 aaPredicted RBP25.33■■□□□ 1.65
HLA-C-209ENST00000495835 FYB2Q5VWT5 728 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 MSANTD2Q6P1R3 559 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 GBP6Q6ZN66 633 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 DGLUCYQ7Z3D6 616 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 DENND1CQ8IV53 801 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 FMNL3Q8IVF7 1028 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 NETO1Q8TDF5 533 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 STK32AQ8WU08 396 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 MED15Q96RN5 788 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 RTKNQ9BST9 563 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 SLC2A11Q9BYW1 496 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 IRX2Q9BZI1 471 aaPredicted RBP25.33■■□□□ 1.65
HLA-C-209ENST00000495835 ARRDC1-AS1Q9H2J1 176 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 THAP9Q9H5L6 903 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 DACH1Q9UI36 760 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 STOML2Q9UJZ1 356 aa25.33■■□□□ 1.65
HLA-C-209ENST00000495835 CDV3Q9UKY7 258 aaKnown RBP25.33■■□□□ 1.65
HLA-C-209ENST00000495835 TRIM24O15164 1050 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 HMBSP08397 361 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 LCP1P13796 627 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 HNRNPLP14866 589 aaKnown RBP eCLIP25.32■■□□□ 1.64
HLA-C-209ENST00000495835 ERCC5P28715 1186 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-209ENST00000495835 ACADSBP45954 432 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 PLA2G2CQ5R387 149 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 TRIM65Q6PJ69 517 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 IRF2BP1Q8IU81 584 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 FAM114A1Q8IWE2 563 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 NDRG1Q92597 394 aaKnown RBP25.32■■□□□ 1.64
HLA-C-209ENST00000495835 GOLGA1Q92805 767 aa25.32■■□□□ 1.64
HLA-C-209ENST00000495835 SART1O43290 800 aaKnown RBP25.31■■□□□ 1.64
HLA-C-209ENST00000495835 GPD2P43304 727 aa25.31■■□□□ 1.64
HLA-C-209ENST00000495835 TPD52L1Q16890 204 aaPredicted RBP25.31■■□□□ 1.64
HLA-C-209ENST00000495835 EXOC3L4Q17RC7 722 aa25.31■■□□□ 1.64
HLA-C-209ENST00000495835 TPSD1Q9BZJ3 242 aa25.31■■□□□ 1.64
HLA-C-209ENST00000495835 VPS45Q9NRW7 570 aa25.31■■□□□ 1.64
HLA-C-209ENST00000495835 APEX2Q9UBZ4 518 aa25.31■■□□□ 1.64
HLA-C-209ENST00000495835 HCN2Q9UL51 889 aa25.31■■□□□ 1.64
HLA-C-209ENST00000495835 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.31■■□□□ 1.64
HLA-C-209ENST00000495835 PLXND1Q9Y4D7 1925 aa25.31■■□□□ 1.64
HLA-C-209ENST00000495835 SDK1Q7Z5N4 2213 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms