RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 UBAP2LQ14157 1087 aaKnown RBP13.48□□□□□ -0.25
PTPN7-217ENST00000495688 NBPF20Q3BBV1 942 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 C16orf46Q6P387 395 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 LCLAT1Q6UWP7 414 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 LRRC74BQ6ZQY2 392 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 APOBEC3FQ8IUX4 373 aaKnown RBP13.48□□□□□ -0.25
PTPN7-217ENST00000495688 CLEC4CQ8WTT0 213 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 TUBB6Q9BUF5 446 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 TXNRD2Q9NNW7 524 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 ZNF180Q9UJW8 692 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 NME7Q9Y5B8 376 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 ENO4A6NNW6 628 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 PPEF2O14830 753 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 GMPRP36959 345 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 TMEM132DQ14C87 1099 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 LMNTD2Q8IXW0 634 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 KBTBD2Q8IY47 623 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 ADGRF2Q8IZF7 708 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 STMN2Q93045 179 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 C7orf26Q96N11 449 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 CYP3A43Q9HB55 503 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 KCNK4Q9NYG8 393 aa13.48□□□□□ -0.25
PTPN7-217ENST00000495688 BCLAF3A2AJT9 711 aaKnown RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 FZD9O00144 591 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PAPSS1O43252 624 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 LYPLA1O75608 230 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 C22orf31O95567 290 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 IL1BP01584 269 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 CYP2F1P24903 491 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 SDC4P31431 198 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 BOLA3Q53S33 107 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 TMEM154Q6P9G4 183 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PGLYRP2Q96PD5 576 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 MRPL45Q9BRJ2 306 aaKnown RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 NT5C1AQ9BXI3 368 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 DPP3Q9NY33 737 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 IL1RAPL1Q9NZN1 696 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PTPRFP10586 1907 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PRR5-ARHGAP8B1AHC4 643 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 TXNP10599 105 aaKnown RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 INSRRP14616 1297 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 TGM2P21980 687 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 CCNFP41002 786 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 ARHGAP8P85298 464 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 KLC1Q07866 573 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 INCA1Q0VD86 236 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PDK2Q15119 407 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 Q3C1V9 767 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 SLC25A41Q8N5S1 370 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 SMC1BQ8NDV3 1235 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 RILPQ96NA2 401 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 DHX35Q9H5Z1 703 aaKnown RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 VRTNQ9H8Y1 702 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 AKT3Q9Y243 479 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PPME1Q9Y570 386 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PAPPA2Q9BXP8 1791 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 MEI4A8MW99 385 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 TRDMT1O14717 391 aaKnown RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 IRF6O14896 467 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 ITM2AO43736 263 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 KRT38O76015 456 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 P4HA1P13674 534 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 ATICP31939 592 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 MAGEA3P43357 314 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 ATG16L1Q676U5 607 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 ATG14Q6ZNE5 492 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 STKLD1Q8NE28 680 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 GSDMBQ8TAX9 411 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 THTPAQ9BU02 230 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 CEP41Q9BYV8 373 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 KRT82Q9NSB4 513 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 PRMT7Q9NVM4 692 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 DLGAP2Q9P1A6 1054 aa13.47□□□□□ -0.25
PTPN7-217ENST00000495688 HBS1LQ9Y450 684 aaKnown RBP13.47□□□□□ -0.25
PTPN7-217ENST00000495688 A0A0G2JMZ2 1700 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 LRRC37A2A6NM11 1700 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 FAM159BA6NKW6 160 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 GSRP00390 522 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 BPGMP07738 259 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 NOL9Q5SY16 702 aaKnown RBP13.46□□□□□ -0.25
PTPN7-217ENST00000495688 LGSNQ5TDP6 509 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 PYROXD2Q8N2H3 581 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 DEPDC1BQ8WUY9 529 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 APOL6Q9BWW8 343 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 MMADHCQ9H3L0 296 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-217ENST00000495688 SMARCAD1Q9H4L7 1026 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 ASB7Q9H672 318 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 STX18Q9P2W9 335 aaKnown RBP13.46□□□□□ -0.25
PTPN7-217ENST00000495688 SNX9Q9Y5X1 595 aa13.46□□□□□ -0.25
PTPN7-217ENST00000495688 E2F8A0AVK6 867 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 WDR27A2RRH5 827 aa13.46□□□□□ -0.26
PTPN7-217ENST00000495688 HBP1O60381 514 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms