RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 SLC5A9Q2M3M2 681 aa6.14□□□□□ -1.43
NCKAP1-208ENST00000495619 MEX3CQ5U5Q3 659 aaKnown RBP6.14□□□□□ -1.43
NCKAP1-208ENST00000495619 IZUMO3Q5VZ72 239 aa6.14□□□□□ -1.43
NCKAP1-208ENST00000495619 ZNF398Q8TD17 642 aa6.14□□□□□ -1.43
NCKAP1-208ENST00000495619 PNISRQ8TF01 805 aaKnown RBP6.14□□□□□ -1.43
NCKAP1-208ENST00000495619 NUDT22Q9BRQ3 303 aa6.14□□□□□ -1.43
NCKAP1-208ENST00000495619 A0A087WZ62 844 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 BCAR3O75815 825 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 CD63P08962 238 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 SRGAP2BP0DMP2 458 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 HARSP12081 509 aaKnown RBP6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 EGR1P18146 543 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 MATN1P21941 496 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 MST1P26927 711 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 PBX1P40424 430 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 TBX4P57082 545 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 HSF1Q00613 529 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 MTAPQ13126 283 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 CNGA3Q16281 694 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 P3H1Q32P28 736 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 AASDHQ4L235 1098 aaPredicted RBP6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 ARL6IP4Q66PJ3 421 aaKnown RBP6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 SLC2A7Q6PXP3 512 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 KIAA0408Q6ZU52 694 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 OR2C3Q8N628 320 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 PIGOQ8TEQ8 1089 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 WDR24Q96S15 920 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 RNF26Q9BY78 433 aaPredicted RBP6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 NUAK2Q9H093 628 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 CERS4Q9HA82 394 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 TM7SF3Q9NS93 570 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 RXFP3Q9NSD7 469 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 RGL1Q9NZL6 768 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 KLHL13Q9P2N7 655 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 CA14Q9ULX7 337 aa6.13□□□□□ -1.43
NCKAP1-208ENST00000495619 PODXLO00592 558 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 ARP10275 920 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 ATP5F1P24539 256 aaPredicted RBP6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 EEF1GP26641 437 aaKnown RBP6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 DUSP1P28562 367 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 GALNSP34059 522 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 TM4SF4P48230 202 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 WDR5P61964 334 aaKnown RBP6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 PMS2P11Q13670 270 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 TMTC4Q5T4D3 741 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 GRHL2Q6ISB3 625 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 RASGRP3Q8IV61 690 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 MAP4K1Q92918 833 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 ZNF778Q96MU6 729 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 GJB4Q9NTQ9 266 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 PHTF1Q9UMS5 762 aa6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 HEMK1Q9Y5R4 338 aaPredicted RBP6.12□□□□□ -1.43
NCKAP1-208ENST00000495619 COL3A1P02461 1466 aaPredicted RBP6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 PRAMEF2O60811 474 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 NDST3O95803 873 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 ATF7P17544 494 aaPredicted RBP6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 GABRB3P28472 473 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 SLC14A1Q13336 389 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 CBFBQ13951 182 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 GLE1Q53GS7 698 aaKnown RBP6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 AWAT1Q58HT5 328 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 TMEM196Q5HYL7 178 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 RAP1GAP2Q684P5 730 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 IL31Q6EBC2 164 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 ZNF425Q6IV72 752 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 C1QL2Q7Z5L3 287 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 MRPL10Q7Z7H8 261 aaKnown RBP6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 PARD3BQ8TEW8 1205 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 TMEM79Q9BSE2 394 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 VPS16Q9H269 839 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 NECTIN3Q9NQS3 549 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 HELLSQ9NRZ9 838 aa6.11□□□□□ -1.43
NCKAP1-208ENST00000495619 FAM234BA2RU67 622 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 OR2W5A6NFC9 320 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 E5RJQ4 531 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 FCHO1O14526 889 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 NCK2O43639 380 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 IGHMBP2P38935 993 aaKnown RBP6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 RPS13P62277 151 aaKnown RBP6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 CSHL1Q14406 222 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 ETFDHQ16134 617 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 SLC35G1Q2M3R5 365 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 KRT27Q7Z3Y8 459 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 UEVLDQ8IX04 471 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 FAM186BQ8IYM0 893 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 CLASRPQ8N2M8 674 aaKnown RBP6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 GLIS1Q8NBF1 620 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 SAP30LQ9HAJ7 183 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 AS3MTQ9HBK9 375 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 VPS4AQ9UN37 437 aa6.1□□□□□ -1.43
NCKAP1-208ENST00000495619 PPEF2O14830 753 aa6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 INPPL1O15357 1258 aa6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 GLP2RO95838 553 aa6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 FGBP02675 491 aa6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 IFIT2P09913 472 aaKnown RBP6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 NEK3P51956 506 aa6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 ID2Q02363 134 aa6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 STIM1Q13586 685 aa6.09□□□□□ -1.43
NCKAP1-208ENST00000495619 KLF9Q13886 244 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms