RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 ANLNQ9NQW6 1124 aa16.33■□□□□ 0.21
PHF1-211ENST00000495509 RRN3Q9NYV6 651 aa16.33■□□□□ 0.21
PHF1-211ENST00000495509 CDC23Q9UJX2 597 aa16.33■□□□□ 0.21
PHF1-211ENST00000495509 DENND4CQ5VZ89 1909 aa16.33■□□□□ 0.21
PHF1-211ENST00000495509 OBSL1O75147 1896 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 CCDC195A0A1B0GUA6 201 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 C2orf78A6NCI8 922 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 I6L893 689 aaPredicted RBP16.33■□□□□ 0.2
PHF1-211ENST00000495509 SOX1O00570 391 aaPredicted RBP16.33■□□□□ 0.2
PHF1-211ENST00000495509 TLR5O60602 858 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 RALAP11233 206 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 GJA1P17302 382 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 DESP17661 470 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
PHF1-211ENST00000495509 GABRR2P28476 465 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 KCNC3Q14003 757 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 GRIN2CQ14957 1233 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 CA9Q16790 459 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 ZC3H12AQ5D1E8 599 aaKnown RBP16.33■□□□□ 0.2
PHF1-211ENST00000495509 TCEAL5Q5H9L2 206 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 MSANTD2Q6P1R3 559 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 PDZD8Q8NEN9 1154 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
PHF1-211ENST00000495509 RNF38Q9H0F5 515 aa16.33■□□□□ 0.2
PHF1-211ENST00000495509 DNMT3BQ9UBC3 853 aaKnown RBP16.33■□□□□ 0.2
PHF1-211ENST00000495509 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.33■□□□□ 0.2
PHF1-211ENST00000495509 A0A1W2PPC1 479 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 PDE2AO00408 941 aaPredicted RBP16.32■□□□□ 0.2
PHF1-211ENST00000495509 CEP104O60308 925 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 MYL4P12829 197 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 CCR2P41597 374 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 CXCR3P49682 368 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 HYAL1Q12794 435 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 ZFYVE27Q5T4F4 411 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 POLNQ7Z5Q5 900 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 MIB1Q86YT6 1006 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 KATNAL2Q8IYT4 538 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 ELMOD1Q8N336 334 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 HDAC7Q8WUI4 952 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 ZNF707Q96C28 371 aaPredicted RBP16.32■□□□□ 0.2
PHF1-211ENST00000495509 PBKQ96KB5 322 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 CYP2S1Q96SQ9 504 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 SNRNP25Q9BV90 132 aaKnown RBP16.32■□□□□ 0.2
PHF1-211ENST00000495509 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
PHF1-211ENST00000495509 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
PHF1-211ENST00000495509 LINC01565O15544 149 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 IRAK2O43187 625 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 COCHO43405 550 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 ZRANB2O95218 330 aaKnown RBP eCLIP16.31■□□□□ 0.2
PHF1-211ENST00000495509 KRT7P08729 469 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 CD48P09326 243 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 GBP1P32455 592 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 NTHL1P78549 312 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 CYP4F8P98187 520 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 ERMARDQ5T6L9 678 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 RTL10Q7L3V2 364 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 PYROXD2Q8N2H3 581 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 CMASQ8NFW8 434 aaPredicted RBP16.31■□□□□ 0.2
PHF1-211ENST00000495509 TCEAL4Q96EI5 215 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 HERPUD2Q9BSE4 406 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 CARD9Q9H257 536 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 WDCPQ9H6R7 721 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 MARCH2Q9P0N8 246 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 RASAL2Q9UJF2 1139 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 FZD10Q9ULW2 581 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 C3orf70A6NLC5 250 aaPredicted RBP16.31■□□□□ 0.2
PHF1-211ENST00000495509 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 GLP2RO95838 553 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 F9P00740 461 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 KRT1P04264 644 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 PTPN2P17706 415 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 HOXA9P31269 272 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 ADRA1BP35368 520 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 MFSD7Q6UXD7 560 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 TMC5Q6UXY8 1006 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 RNF34Q969K3 372 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 NCAPGQ9BPX3 1015 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 PRKD2Q9BZL6 878 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 NSUN3Q9H649 340 aaKnown RBP16.31■□□□□ 0.2
PHF1-211ENST00000495509 ASAH2Q9NR71 780 aa16.31■□□□□ 0.2
PHF1-211ENST00000495509 OLA1Q9NTK5 396 aaKnown RBP16.31■□□□□ 0.2
PHF1-211ENST00000495509 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.31■□□□□ 0.2
PHF1-211ENST00000495509 UQCRHLA0A096LP55 91 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 A0A1W2PRU2 124 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 LRRD1A4D1F6 860 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 UQCRHP07919 91 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 HMBSP08397 361 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
PHF1-211ENST00000495509 KDELR1P24390 212 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 ATP5C1P36542 298 aaKnown RBP16.3■□□□□ 0.2
PHF1-211ENST00000495509 PPP3CCP48454 512 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 PABPC1LQ4VXU2 614 aaKnown RBP16.3■□□□□ 0.2
PHF1-211ENST00000495509 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
PHF1-211ENST00000495509 SND1Q7KZF4 910 aaKnown RBP eCLIP16.3■□□□□ 0.2
PHF1-211ENST00000495509 GRASPQ7Z6J2 395 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms