RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TAC4Q86UU9 113 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 PHF13Q86YI8 300 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-212ENST00000495497 ADGRG2Q8IZP9 1017 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.28■□□□□ 0.84
HDAC4-212ENST00000495497 ECT2Q9H8V3 914 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 ARHGAP20Q9P2F6 1191 aa20.28■□□□□ 0.84
HDAC4-212ENST00000495497 LSM7Q9UK45 103 aaKnown RBP20.28■□□□□ 0.84
HDAC4-212ENST00000495497 SYNJ2BP-COX16A0A087WUM0 186 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 MFAP3LO75121 409 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 DAB1O75553 588 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 TPM1P09493 284 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 CORO1AP31146 461 aaKnown RBP20.27■□□□□ 0.84
HDAC4-212ENST00000495497 TRIP4Q15650 581 aaPredicted RBP20.27■□□□□ 0.84
HDAC4-212ENST00000495497 Q6ZNB5 142 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 MON1BQ7L1V2 547 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 DENND1CQ8IV53 801 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 OR8K1Q8NGG5 319 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 ATP2A3Q93084 1043 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 MRFAP1L1Q96HT8 127 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 DNAJC7Q99615 494 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 METTL5Q9NRN9 209 aaKnown RBP20.27■□□□□ 0.84
HDAC4-212ENST00000495497 COX16Q9P0S2 106 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 TBC1D14Q9P2M4 693 aa20.27■□□□□ 0.84
HDAC4-212ENST00000495497 HBS1LQ9Y450 684 aaKnown RBP20.27■□□□□ 0.84
HDAC4-212ENST00000495497 TECTAO75443 2155 aa20.27■□□□□ 0.83
HDAC4-212ENST00000495497 STK25O00506 426 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 SLC9A3R1O14745 358 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 NFATC1O95644 943 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 TRUB2O95900 331 aaKnown RBP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 CALB1P05937 261 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 HNRNPH3P31942 346 aaKnown RBP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 TBX4P57082 545 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 NAIF1Q69YI7 327 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 TRNP1Q6NT89 227 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 RHBDF2Q6PJF5 856 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 MCOLN2Q8IZK6 566 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 CPA6Q8N4T0 437 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 EMC1Q8N766 993 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 FLCNQ8NFG4 579 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 PBXIP1Q96AQ6 731 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 PLD4Q96BZ4 506 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 CHFRQ96EP1 664 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 TRIM62Q9BVG3 475 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 ADAM33Q9BZ11 813 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 MFSD1Q9H3U5 465 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 TBC1D17Q9HA65 648 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 ABHD10Q9NUJ1 306 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 ADAMTS1Q9UHI8 967 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 TMEM59LQ9UK28 342 aa20.26■□□□□ 0.83
HDAC4-212ENST00000495497 AGO1Q9UL18 857 aaKnown RBP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 BZW2Q9Y6E2 419 aaKnown RBP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 KIF26AQ9ULI4 1882 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-212ENST00000495497 COL4A2P08572 1712 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 AKR1B15C9JRZ8 316 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-212ENST00000495497 SPECC1L-ADORA2AF8WAN1 911 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 CYP17A1P05093 508 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 TFE3P19532 575 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-212ENST00000495497 FLT3P36888 993 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 SCNN1AP37088 669 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 VCPP55072 806 aaKnown RBP20.25■□□□□ 0.83
HDAC4-212ENST00000495497 STARD6P59095 220 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 CDK17Q00537 523 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 PRKCQQ04759 706 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 C1QBPQ07021 282 aaKnown RBP20.25■□□□□ 0.83
HDAC4-212ENST00000495497 ARID5BQ14865 1188 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 DHCR24Q15392 516 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 TXNDC11Q6PKC3 985 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 KIAA1958Q8N8K9 716 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 JOSD2Q8TAC2 188 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 FCRL2Q96LA5 508 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-212ENST00000495497 SERPINB11Q96P15 392 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 FOXQ1Q9C009 403 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 FAM204AQ9H8W3 233 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 CALCOCO1Q9P1Z2 691 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 MTF2Q9Y483 593 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-212ENST00000495497 TICRRQ7Z2Z1 1910 aa20.25■□□□□ 0.83
HDAC4-212ENST00000495497 IRAK2O43187 625 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 ATMINO43313 823 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-212ENST00000495497 GPR37L1O60883 481 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 IGLV3-25P01717 112 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 IGLV3-27P01718 113 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 FTLP02792 175 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-212ENST00000495497 GJA4P35212 333 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 NOS2P35228 1153 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 EIF4A3P38919 411 aaKnown RBP20.24■□□□□ 0.83
HDAC4-212ENST00000495497 MATKP42679 507 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 LY6G5CQ5SRR4 150 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 OTUD1Q5VV17 481 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-212ENST00000495497 CWF19L1Q69YN2 538 aaKnown RBP20.24■□□□□ 0.83
HDAC4-212ENST00000495497 TPGS1Q6ZTW0 290 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 TMEM25Q86YD3 366 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 DCLK3Q9C098 648 aa20.24■□□□□ 0.83
HDAC4-212ENST00000495497 C8orf33Q9H7E9 229 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-212ENST00000495497 A0A087X0T9 212 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 TRDMT1O14717 391 aaKnown RBP20.23■□□□□ 0.83
HDAC4-212ENST00000495497 RTN2O75298 545 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 ADCY5O95622 1261 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 FAM228BP0C875 321 aa20.23■□□□□ 0.83
HDAC4-212ENST00000495497 GZMAP12544 262 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms