RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ARHGAP8P85298 464 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 BTKQ06187 659 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 MCL1Q07820 350 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 FOXD4Q12950 439 aaPredicted RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 SURF1Q15526 300 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 LACTB2Q53H82 288 aaPredicted RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 LBX2Q6XYB7 198 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 RINLQ6ZS11 566 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 SLC26A11Q86WA9 606 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 OR52K1Q8NGK4 314 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 PCDH19Q8TAB3 1148 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 RHOBTB2Q9BYZ6 727 aa13.91□□□□□ -0.18
GPC1-209ENST00000495100 APOBEC2Q9Y235 224 aaKnown RBP13.91□□□□□ -0.18
GPC1-209ENST00000495100 hCG_2014768A0A024R1R8 64 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 CCDC22O60826 627 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 ZWINTO95229 277 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 PTP4A2Q12974 167 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 OASLQ15646 514 aaKnown RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 TEX9Q8N6V9 391 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 WDR60Q8WVS4 1066 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 GRAMD1AQ96CP6 724 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 VCPIP1Q96JH7 1222 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 RNF157Q96PX1 679 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 OMDQ99983 421 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 PNPOQ9NVS9 261 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 DDIT4Q9NX09 232 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 CPA4Q9UI42 421 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 ARFGEF1Q9Y6D6 1849 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 EVPLQ92817 2033 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 NVLO15381 856 aaKnown RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 DCXO43602 365 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 PLA2G6O60733 806 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 IGFBP6P24592 240 aaPredicted RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 GCAP28676 217 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 FASTKD1Q53R41 847 aaKnown RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 XRRA1Q6P2D8 792 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 WDR75Q8IWA0 830 aaKnown RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 IPMKQ8NFU5 416 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 UCMAQ8WVF2 138 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 BHMTQ93088 406 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 ZNF570Q96NI8 536 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 TBCBQ99426 244 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 ACSS3Q9H6R3 686 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 PAK5Q9P286 719 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 CCL22O00626 93 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 ITGAVP06756 1048 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 CASP2P42575 452 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 SARNPP82979 210 aaKnown RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 SLC12A1Q13621 1099 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 FBXO48Q5FWF7 155 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 C15orf39Q6ZRI6 1047 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 BZW1Q7L1Q6 419 aaKnown RBP13.9□□□□□ -0.18
GPC1-209ENST00000495100 GALNT4Q8N4A0 578 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 XYLT2Q9H1B5 865 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 NOD1Q9Y239 953 aa13.9□□□□□ -0.18
GPC1-209ENST00000495100 SORBS2O94875 1100 aaKnown RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 JCHAINP01591 159 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 VDRP11473 427 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 CA8P35219 290 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 POU6F1Q14863 301 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 UNC5AQ6ZN44 842 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 OXNAD1Q96HP4 312 aaPredicted RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 IL1RL2Q9HB29 575 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 TPP1O14773 563 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 GSTA1P08263 222 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 C6orf222P0C671 652 aaPredicted RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 DEUP1Q05D60 604 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 CCDC14Q49A88 953 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 TTC39BQ5VTQ0 682 aaPredicted RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 GSTCDQ8NEC7 633 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 PCDH18Q9HCL0 1135 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 C20orf96Q9NUD7 363 aaPredicted RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 RNF103O00237 685 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 MAP3K7O43318 606 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 LSM8O95777 96 aaKnown RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 PROCP04070 461 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 USP17L7P0C7H9 530 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 GM2AP17900 193 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 GPD2P43304 727 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 CCR10P46092 362 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 YWHAZP63104 245 aaKnown RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 SLC25A11Q02978 314 aaKnown RBP13.89□□□□□ -0.19
GPC1-209ENST00000495100 GPR162Q16538 588 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 THEMIS2Q5TEJ8 643 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 SDHAF4Q5VUM1 108 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 ATG16L1Q676U5 607 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 TTC30AQ86WT1 665 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 AGGF1Q8N302 714 aaeCLIP13.89□□□□□ -0.19
GPC1-209ENST00000495100 BEST2Q8NFU1 509 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 SLC35B2Q8TB61 432 aa13.89□□□□□ -0.19
GPC1-209ENST00000495100 SHKBP1Q8TBC3 707 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms