RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 MSRAQ9UJ68 235 aa11.48□□□□□ -0.57
PKP4-215ENST00000494945 AP4E1Q9UPM8 1137 aa11.48□□□□□ -0.57
PKP4-215ENST00000494945 YBX2Q9Y2T7 364 aaKnown RBP11.48□□□□□ -0.57
PKP4-215ENST00000494945 TRANK1O15050 2925 aa11.48□□□□□ -0.57
PKP4-215ENST00000494945 MYO18AQ92614 2054 aaKnown RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 NYNRINQ9P2P1 1898 aaKnown RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 hCG_1818297A0A087WSY0 165 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 HIDE1A8MVS5 230 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 PI4K2BG5E9Z4 385 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 H0YGN5 161 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 GRM6O15303 877 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 IRAK2O43187 625 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 TJP3O95049 919 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 HMGA1P17096 107 aaKnown RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 ARSEP51690 589 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 ATXN1P54253 815 aaKnown RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 CDH6P55285 790 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 SCAPQ12770 1279 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 TWF1Q12792 350 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 NME3Q13232 169 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 KLF1Q13351 362 aaPredicted RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 NNTQ13423 1086 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 EIF4EBP2Q13542 120 aaPredicted RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 KRT81Q14533 505 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 TAF12Q16514 161 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 DPYSL2Q16555 572 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 BRMS1LQ5PSV4 323 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 CCDC70Q6NSX1 233 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 TADA2BQ86TJ2 420 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 FAM131BQ86XD5 332 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 CCDC185Q8N715 623 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 KREMEN2Q8NCW0 462 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 ADAM32Q8TC27 787 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 PSMG2Q969U7 264 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 ACSF2Q96CM8 615 aaPredicted RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 SERPINB11Q96P15 392 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 PBX4Q9BYU1 374 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 LMAN2LQ9H0V9 348 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 WDR6Q9NNW5 1121 aaKnown RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 HOMER3Q9NSC5 361 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
PKP4-215ENST00000494945 OSER1Q9NX31 292 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.47□□□□□ -0.57
PKP4-215ENST00000494945 RCOR3Q9P2K3 495 aaPredicted RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
PKP4-215ENST00000494945 MAGED2Q9UNF1 606 aaPredicted RBP11.47□□□□□ -0.57
PKP4-215ENST00000494945 TNRC18O15417 2968 aaPredicted RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 SYNJ2BP-COX16A0A087WUM0 186 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 UQCRHLA0A096LP55 91 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 LRG1P02750 347 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 UQCRHP07919 91 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 RARGP13631 454 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 L1CAMP32004 1257 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 ADRA1BP35368 520 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 PBX2P40425 430 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 PGFP49763 221 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 CLCN4P51793 760 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 ZNF135P52742 658 aaPredicted RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 CAMK1Q14012 370 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 TFDP2Q14188 446 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 DPYSL3Q14195 570 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 PPP2R5DQ14738 602 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 SIX1Q15475 284 aaPredicted RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 CYP1B1Q16678 543 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 GLE1Q53GS7 698 aaKnown RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 TEX35Q5T0J7 233 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 SPRED2Q7Z698 418 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 DNAJB7Q7Z6W7 309 aaPredicted RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 C12orf50Q8NA57 414 aaPredicted RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 NOA1Q8NC60 698 aaKnown RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 MICAL1Q8TDZ2 1067 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 HDAC7Q8WUI4 952 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 CASP10Q92851 521 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 ZNF512Q96ME7 567 aaPredicted RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 ZNF670Q9BS34 389 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 AP1M1Q9BXS5 423 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 CALN1Q9BXU9 219 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 NKX2-4Q9H2Z4 354 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 SLITRK6Q9H5Y7 841 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 DHX35Q9H5Z1 703 aaKnown RBP11.46□□□□□ -0.57
PKP4-215ENST00000494945 WDCPQ9H6R7 721 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 PRDM16Q9HAZ2 1276 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 PCDH18Q9HCL0 1135 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.46□□□□□ -0.57
PKP4-215ENST00000494945 TRPM5Q9NZQ8 1165 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 COX16Q9P0S2 106 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 TLR6Q9Y2C9 796 aa11.46□□□□□ -0.57
PKP4-215ENST00000494945 MIA3Q5JRA6 1907 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 CHD9Q3L8U1 2897 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 TCRBV7S2A1N4TA0A589 114 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 ZNF840PA6NDX5 716 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 TLR5O60602 858 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 PHF2O75151 1096 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 C8AP07357 584 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 CD48P09326 243 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 SPATA31D3P0C874 917 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 SLC2A3P11169 496 aa11.45□□□□□ -0.58
PKP4-215ENST00000494945 CCR1P32246 355 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms