RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RASSF3Q86WH2 238 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 PPM1KQ8N3J5 372 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 ZNF276Q8N554 614 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 DEFB119Q8N690 84 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 EHBP1Q8NDI1 1231 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 HMGB4Q8WW32 186 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 ACOX2Q99424 681 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 RTKNQ9BST9 563 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 GTPBP4Q9BZE4 634 aaKnown RBP10.07□□□□□ -0.8
MSH5-218ENST00000494646 CLIC5Q9NZA1 410 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 BCCIPQ9P287 314 aaKnown RBP eCLIP10.07□□□□□ -0.8
MSH5-218ENST00000494646 WDR35Q9P2L0 1181 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 HESX1Q9UBX0 185 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 SFMBT1Q9UHJ3 866 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 TCRBV21S2A2A0A5A6 115 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 WASH3PC4AMC7 463 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 XPO1O14980 1071 aaKnown RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 TSPAN3O60637 253 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 CAVIN2O95810 425 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 TBXAS1P24557 533 aaPredicted RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 NTSR1P30989 418 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 CORO1AP31146 461 aaKnown RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 MPLP40238 635 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 PPP1R2P41236 205 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 DHPSP49366 369 aaPredicted RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 DGKGP49619 791 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 ADIGQ0VDE8 80 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 PREPLQ4J6C6 727 aaPredicted RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 EGFLAMQ63HQ2 1017 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 PM20D1Q6GTS8 502 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 TCEAL6Q6IPX3 200 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 Q6ZNB5 142 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 RSRC2Q7L4I2 434 aaKnown RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 DENND1CQ8IV53 801 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 ARHGEF19Q8IW93 802 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 TMEFF1Q8IYR6 380 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 UBR7Q8N806 425 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 TERB1Q8NA31 727 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 OLIG1Q8TAK6 271 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 LMO3Q8TAP4 145 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 NETO1Q8TDF5 533 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 TFAP2BQ92481 460 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 EDEM1Q92611 657 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 TCEAL3Q969E4 200 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 CNOT6LQ96LI5 555 aaKnown RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 NT5C1BQ96P26 610 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 MARK1Q9P0L2 795 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 MARCH2Q9P0N8 246 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 AGO1Q9UL18 857 aaKnown RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 KIAA1257Q9ULG3 409 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 STARD13Q9Y3M8 1113 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 RAD54BQ9Y620 910 aa10.06□□□□□ -0.8
MSH5-218ENST00000494646 CNOT1A5YKK6 2376 aaKnown RBP10.06□□□□□ -0.8
MSH5-218ENST00000494646 BICDL2A1A5D9 508 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 YJEFN3A6XGL0 299 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 E7ENQ6 273 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 O00370 1275 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 SLC30A4O14863 429 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 HOXB2P14652 356 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 BRD2P25440 801 aaKnown RBP10.05□□□□□ -0.8
MSH5-218ENST00000494646 BCAT1P54687 386 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 BST2Q10589 180 aaKnown RBP10.05□□□□□ -0.8
MSH5-218ENST00000494646 CETN1Q12798 172 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 HSF5Q4G112 596 aaPredicted RBP10.05□□□□□ -0.8
MSH5-218ENST00000494646 BSPRYQ5W0U4 402 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 PMS2CLQ68D20 193 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 SDE2Q6IQ49 451 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 PMF1Q6P1K2 205 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 BHLHA9Q7RTU4 235 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 FMNL3Q8IVF7 1028 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 CHPFQ8IZ52 775 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 ARHGAP18Q8N392 663 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 RNF139Q8WU17 664 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 PIGKQ92643 395 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 CDK5RAP1Q96SZ6 601 aaKnown RBP10.05□□□□□ -0.8
MSH5-218ENST00000494646 ZSWIM1Q9BR11 485 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 DCLK3Q9C098 648 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 FAM124BQ9H5Z6 455 aaPredicted RBP10.05□□□□□ -0.8
MSH5-218ENST00000494646 VPS45Q9NRW7 570 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 MBD1Q9UIS9 605 aaPredicted RBP10.05□□□□□ -0.8
MSH5-218ENST00000494646 STRIP2Q9ULQ0 834 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 CLEC4EQ9ULY5 219 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 ZNF510Q9Y2H8 683 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 PCDHGA5Q9Y5G8 931 aa10.05□□□□□ -0.8
MSH5-218ENST00000494646 A0A1W2PQF6 199 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 BCLAF3A2AJT9 711 aaKnown RBP10.04□□□□□ -0.8
MSH5-218ENST00000494646 PATE3B3GLJ2 98 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 CACNG3O60359 315 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 FOXD2O60548 495 aaPredicted RBP10.04□□□□□ -0.8
MSH5-218ENST00000494646 GABBR2O75899 941 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 AFPP02771 609 aaKnown RBP10.04□□□□□ -0.8
MSH5-218ENST00000494646 GABRG2P18507 467 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 CHKAP35790 457 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 P2RY2P41231 377 aa10.04□□□□□ -0.8
MSH5-218ENST00000494646 PAK1Q13153 545 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms