RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 EPHA5P54756 1037 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 RWDD2BP57060 319 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 HYAL1Q12794 435 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 EFEMP1Q12805 493 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 NNTQ13423 1086 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 EIF4EBP2Q13542 120 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-231ENST00000494043 SMTNL2Q2TAL5 461 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 BOLA3Q53S33 107 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 HECTD3Q5T447 861 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 ZNF697Q5TEC3 545 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 DCAF12L1Q5VU92 463 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 SCYL2Q6P3W7 929 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 GAREM2Q75VX8 874 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 SND1Q7KZF4 910 aaKnown RBP eCLIP11.87□□□□□ -0.51
MCF2L-231ENST00000494043 FAM131BQ86XD5 332 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 KATNAL2Q8IYT4 538 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 EFHBQ8N7U6 833 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 LEMD2Q8NC56 503 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-231ENST00000494043 TEKT4Q8WW24 435 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-231ENST00000494043 GCNAQ96QF7 691 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 CARD9Q9H257 536 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 IGFLR1Q9H665 355 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 ZWILCHQ9H900 591 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 SFXN1Q9H9B4 322 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 WDR6Q9NNW5 1121 aaKnown RBP11.87□□□□□ -0.51
MCF2L-231ENST00000494043 TMEM51Q9NW97 253 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 HCFC1R1Q9NWW0 138 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 DDX56Q9NY93 547 aaKnown RBP11.87□□□□□ -0.51
MCF2L-231ENST00000494043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.87□□□□□ -0.513e-7■■■■■ 37.4
MCF2L-231ENST00000494043 MARCH2Q9P0N8 246 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 COX16Q9P0S2 106 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 SFMBT1Q9UHJ3 866 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 RASAL2Q9UJF2 1139 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 NUDT5Q9UKK9 219 aa11.87□□□□□ -0.51
MCF2L-231ENST00000494043 CCDC195A0A1B0GUA6 201 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 C2orf78A6NCI8 922 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-231ENST00000494043 CES2O00748 559 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 MDM4O15151 490 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 MSI1O43347 362 aaKnown RBP11.86□□□□□ -0.51
MCF2L-231ENST00000494043 COCHO43405 550 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 SRGAP2O75044 1071 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 GLP2RO95838 553 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 OAS1P00973 400 aaKnown RBP11.86□□□□□ -0.51
MCF2L-231ENST00000494043 KRT1P04264 644 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 RARAP10276 462 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 MYL4P12829 197 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 PTPN2P17706 415 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 CXCR5P32302 372 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 TUBB2AQ13885 445 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 ATP13A4Q4VNC1 1196 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 KCNT1Q5JUK3 1230 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 TMEM184AQ6ZMB5 413 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 CCDC185Q8N715 623 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 EXD1Q8NHP7 514 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 COG1Q8WTW3 980 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 MRPS31Q92665 395 aaKnown RBP11.86□□□□□ -0.51
MCF2L-231ENST00000494043 NTAN1Q96AB6 310 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 ACSF2Q96CM8 615 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-231ENST00000494043 PBKQ96KB5 322 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 SNRNP25Q9BV90 132 aaKnown RBP11.86□□□□□ -0.51
MCF2L-231ENST00000494043 TUBB2BQ9BVA1 445 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 KLHL11Q9NVR0 708 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 DNMT3BQ9UBC3 853 aaKnown RBP11.86□□□□□ -0.51
MCF2L-231ENST00000494043 DNMT3LQ9UJW3 386 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 MRFAP1Q9Y605 127 aa11.86□□□□□ -0.51
MCF2L-231ENST00000494043 CDH23Q9H251 3354 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 A0A1W2PRU2 124 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 ZNF185O15231 689 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 RHOP08100 348 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 SRGAP2BP0DMP2 458 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 PYGMP11217 842 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 POU3F3P20264 500 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 ATP5C1P36542 298 aaKnown RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 KPNA1P52294 538 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 AIF1P55008 147 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 TBX4P57082 545 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 CYP4F8P98187 520 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 SCAPQ12770 1279 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 ZNF211Q13398 564 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 PPP2R5DQ14738 602 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 TRIP4Q15650 581 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 BRMS1LQ5PSV4 323 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 ZFYVE27Q5T4F4 411 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 ERMARDQ5T6L9 678 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 SEL1L2Q5TEA6 688 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 MIB1Q86YT6 1006 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 PSTKQ8IV42 348 aaKnown RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 RCOR2Q8IZ40 523 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 C12orf76Q8N812 135 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 SHKBP1Q8TBC3 707 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 SMG7Q92540 1137 aaKnown RBP11.85□□□□□ -0.51
MCF2L-231ENST00000494043 HSPH1Q92598 858 aa11.85□□□□□ -0.51
MCF2L-231ENST00000494043 RNF34Q969K3 372 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms