RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CENPIQ92674 756 aaPredicted RBP14.3□□□□□ -0.12
VCP-207ENST00000493886 TACO1Q9BSH4 297 aaKnown RBP14.3□□□□□ -0.12
VCP-207ENST00000493886 TCRBV7S3A2A0A539 114 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 TMEM63AO94886 807 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 PYGBP11216 843 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 TGM2P21980 687 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 GCAP28676 217 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 BCAR1P56945 870 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 BASP1P80723 227 aaKnown RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 FOXD4Q12950 439 aaPredicted RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 PPP6R3Q5H9R7 873 aaPredicted RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 FNBP1LQ5T0N5 605 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 SLC9A4Q6AI14 798 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 RSPH3Q86UC2 560 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 SDR16C5Q8N3Y7 309 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 WNT8BQ93098 351 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 HNRNPABQ99729 332 aaKnown RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 ZNF670Q9BS34 389 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 FAM105AQ9NUU6 356 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 FAM155AB1AL88 458 aaPredicted RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 SMAPO00193 183 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 XPO1O14980 1071 aaKnown RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 CTSHP09668 335 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 RARBP10826 455 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 KRT15P19012 456 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 WDR4P57081 412 aaKnown RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 SREBF2Q12772 1141 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 MSS51Q4VC12 460 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 WLSQ5T9L3 541 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 MFSD14CQ5VZR4 134 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 WSCD1Q658N2 575 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 DRAXINQ8NBI3 349 aaPredicted RBP14.29□□□□□ -0.12
VCP-207ENST00000493886 TRIB2Q92519 343 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 ARL2BPQ9Y2Y0 163 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 HEY1Q9Y5J3 304 aa14.29□□□□□ -0.12
VCP-207ENST00000493886 IGFBP6P24592 240 aaPredicted RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 ACAT1P24752 427 aaKnown RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 CDC25CP30307 473 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 PIGZQ86VD9 579 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 TDRPQ86YL5 185 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 PYROXD1Q8WU10 500 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 MAML1Q92585 1016 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 FAF2Q96CS3 445 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 DUSP16Q9BY84 665 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 PITPNM3Q9BZ71 974 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 ARHGAP39Q9C0H5 1083 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 USP29Q9HBJ7 922 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.28□□□□□ -0.12
VCP-207ENST00000493886 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 XPO7Q9UIA9 1087 aaKnown RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 ACTL7BQ9Y614 415 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 SLC8A1P32418 973 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 GBP2P32456 591 aaPredicted RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 MLH1P40692 756 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 GPX6P59796 221 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 DPYSL2Q16555 572 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 ECHDC2Q86YB7 292 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 GSTCDQ8NEC7 633 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 GAD1Q99259 594 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 DHX35Q9H5Z1 703 aaKnown RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 SLC38A7Q9NVC3 462 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 KLHL14Q9P2G3 628 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 GABRQQ9UN88 632 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 CLUHO75153 1309 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 ZNF487B1APH4 448 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 E7ESA3 106 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 CLDN5O00501 218 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 CHRNA1P02708 482 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 TAC1P20366 129 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 CYP2F1P24903 491 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 L1CAMP32004 1257 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 SLC8A3P57103 927 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 ADIGQ0VDE8 80 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 PKN2Q16513 984 aaKnown RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 SLC5A9Q2M3M2 681 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 EFHC1Q5JVL4 640 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 SENP6Q9GZR1 1112 aaPredicted RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 UPF3AQ9H1J1 476 aaKnown RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 UBN1Q9NPG3 1134 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 ZMYND8Q9ULU4 1186 aaPredicted RBP14.28□□□□□ -0.12
VCP-207ENST00000493886 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
VCP-207ENST00000493886 GABRDO14764 452 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 KCNN4O15554 427 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 MAP3K6O95382 1288 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 FCGRTP55899 365 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 EFTUD2Q15029 972 aaKnown RBP eCLIP14.27□□□□□ -0.123e-6■■■□□ 16.4
VCP-207ENST00000493886 HACE1Q8IYU2 909 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 PDIK1LQ8N165 341 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 ATP11CQ8NB49 1132 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 WDR83Q9BRX9 315 aaKnown RBP14.27□□□□□ -0.12
VCP-207ENST00000493886 C12orf65Q9H3J6 166 aaKnown RBP14.27□□□□□ -0.12
VCP-207ENST00000493886 NRDE2Q9H7Z3 1164 aa14.27□□□□□ -0.12
VCP-207ENST00000493886 CFAP69A5D8W1 941 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms