RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 A0A087WXM4 84 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 VPS4BO75351 444 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 NR3C2P08235 984 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 UCHL3P15374 230 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 HPCAL1P37235 193 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 BOLA3Q53S33 107 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 OTUD3Q5T2D3 398 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PACS1Q6VY07 963 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 AGMOQ6ZNB7 445 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 LRRC6Q86X45 466 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 FBXO36Q8NEA4 188 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 UBA3Q8TBC4 463 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 FNIP1Q8TF40 1166 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM237Q96Q45 408 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 ORAI2Q96SN7 254 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 TBCDQ9BTW9 1192 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 PRKD2Q9BZL6 878 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 WDCPQ9H6R7 721 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 AFF2P51816 1311 aa8.07□□□□□ -1.12
BRCA1-221ENST00000493795 NPHP3-ACAD11A0A0J9YXS1 232 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 SMCO3A2RU48 225 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CCDC154A6NI56 674 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 FAM25EA8MYX2 175 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 GLP2RO95838 553 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 EGFRP00533 1210 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 TCF4P15884 667 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 GLRBP48167 497 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 NAA30Q147X3 362 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 PDIA6Q15084 440 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 EZH2Q15910 746 aaKnown RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ALG11Q2TAA5 492 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 INO80DQ53TQ3 878 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CCSAPQ6IQ19 270 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ZFP1Q6P2D0 407 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CCDC80Q76M96 950 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 OR52L1Q8NGH7 329 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ZSCAN18Q8TBC5 510 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 KBTBD7Q8WVZ9 684 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 MASTLQ96GX5 879 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 BBS4Q96RK4 519 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CCDC59Q9P031 241 aaKnown RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 GPC6Q9Y625 555 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 NESP48681 1621 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 TTLL13PA6NNM8 815 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 H7C4K7 107 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 MAGEB2O15479 319 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ADCY6O43306 1168 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 UPP2O95045 317 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ODC1P11926 461 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 HSD17B3P37058 310 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CBX5P45973 191 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 OR1G1P47890 313 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CDC42P60953 191 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 MTF1Q14872 753 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ZMYND11Q15326 602 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 QRICH1Q2TAL8 776 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 MTDHQ86UE4 582 aaKnown RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 DEFB107AQ8IZN7 70 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 IL17REQ8NFR9 667 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 STRBPQ96SI9 672 aaKnown RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CELF4Q9BZC1 486 aaKnown RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM8AQ9HCN3 771 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 LIMD1Q9UGP4 676 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 PFDN2Q9UHV9 154 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 AP3M1Q9Y2T2 418 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 NDUFAF1Q9Y375 327 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 PCDHB7Q9Y5E2 793 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CCNT2O60583 730 aaKnown RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 KATNA1O75449 491 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 TCEA3O75764 348 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 TDP2O95551 362 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ATP6V1G2O95670 118 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CPA3P15088 417 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 HSD3B2P26439 372 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ATP2C1P98194 919 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 HSF2Q03933 536 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 TMEM63BQ5T3F8 832 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 EXOC3L1Q86VI1 746 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 TTLL6Q8N841 843 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 RASSF5Q8WWW0 418 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 SERAC1Q96JX3 654 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 BHLHE41Q9C0J9 482 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 GPAMQ9HCL2 828 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 PDGFCQ9NRA1 345 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ASAP1Q9ULH1 1129 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 PP2D1A8MPX8 630 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 ACSL4O60488 711 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 CTSHP09668 335 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 PRG2P13727 222 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 GTF2H1P32780 548 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 RPL19P84098 196 aaKnown RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 SLC34A1Q06495 639 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 PDIA5Q14554 519 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 NECTIN1Q15223 517 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 DHRSXQ8N5I4 330 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 SAMD3Q8N6K7 520 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 MED8Q96G25 268 aa8.06□□□□□ -1.12
BRCA1-221ENST00000493795 RPRD1AQ96P16 312 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-221ENST00000493795 NIF3L1Q9GZT8 377 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms