RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ABCA6Q8N139 1617 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 GLI1P08151 1106 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 ACAP1Q15027 740 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 KCNT1Q5JUK3 1230 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 PLEKHA7Q6IQ23 1121 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 ANKRD13AQ8IZ07 590 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 FBXO32Q969P5 355 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 CATSPER2Q96P56 530 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 ELOVL6Q9H5J4 265 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 MYOZ2Q9NPC6 264 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 CISHQ9NSE2 258 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 LNPEPQ9UIQ6 1025 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 KPNA4O00629 521 aaPredicted RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 DYRK3O43781 588 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 SLC1A6P48664 564 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 CASP4P49662 377 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 TOB1P50616 345 aaPredicted RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 AGKQ53H12 422 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 NSMCE2Q96MF7 247 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 STK39Q9UEW8 545 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 SRRM3A6NNA2 597 aaPredicted RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 HACD1B0YJ81 288 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 FAM220BPB1ANY3 271 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 CYB561D2O14569 222 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 DDHD2O94830 711 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 GYS1P13807 737 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 EPB42P16452 691 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 ANGEL2Q5VTE6 544 aaKnown RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 TMC3Q7Z5M5 1100 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 TRIM48Q8IWZ4 208 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 MCOLN2Q8IZK6 566 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 ATG16L2Q8NAA4 619 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 COLGALT1Q8NBJ5 622 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 CEP44Q9C0F1 390 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 ARMC7Q9H6L4 198 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 AVENQ9NQS1 362 aaPredicted RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 GEMIN8Q9NWZ8 242 aaKnown RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 KLHL20Q9Y2M5 609 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 ZMYM2Q9UBW7 1377 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 BCL10O95999 233 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 LPCAT2Q7L5N7 544 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 DEPDC7Q96QD5 511 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 FAM192AQ9GZU8 254 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 AHSPQ9NZD4 102 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 PNMA8CA0A1B0GUJ8 204 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 TRIM13O60858 407 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 CENPAP49450 140 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 ERMARDQ5T6L9 678 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 TMEM26Q6ZUK4 368 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 EID3Q8N140 333 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 OXNAD1Q96HP4 312 aaPredicted RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 APOL4Q9BPW4 351 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 PAPOLBQ9NRJ5 636 aaKnown RBP20.65■□□□□ 0.9
RNF40-203ENST00000493683 KLHL28Q9NXS3 571 aa20.65■□□□□ 0.9
RNF40-203ENST00000493683 PPP2R1BP30154 601 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 GLRBP48167 497 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 GCNT1Q02742 428 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 NT5DC1Q5TFE4 455 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 DHFR2Q86XF0 187 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 ACTL9Q8TC94 416 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 RXFP2Q8WXD0 754 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 NRDE2Q9H7Z3 1164 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 OSGEPQ9NPF4 335 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 GGA3Q9NZ52 723 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 TAF6LQ9Y6J9 622 aa20.64■□□□□ 0.9
RNF40-203ENST00000493683 CENPXA8MT69 81 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 CYP2F1P24903 491 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 MLH1P40692 756 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 MAGEA10P43363 369 aaPredicted RBP20.64■□□□□ 0.89
RNF40-203ENST00000493683 DDX39BQ13838 428 aaKnown RBP20.64■□□□□ 0.89
RNF40-203ENST00000493683 PGS1Q32NB8 556 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 STARD8Q92502 1023 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 UGT2B28Q9BY64 529 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 NMRAL1Q9HBL8 299 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 RPS6KB2Q9UBS0 482 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 H3BQF6 201 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 TRDMT1O14717 391 aaKnown RBP20.64■□□□□ 0.89
RNF40-203ENST00000493683 AKAP3O75969 853 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 ZNF682O95780 498 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 EN1Q05925 392 aaPredicted RBP20.64■□□□□ 0.89
RNF40-203ENST00000493683 TRAF2Q12933 501 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 DDR2Q16832 855 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 HERC6Q8IVU3 1022 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 DLG3Q92796 817 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 MED26O95402 600 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 CYP2B6P20813 491 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 VAC14Q08AM6 782 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 CSHL1Q14406 222 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 LZTR1Q8N653 840 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 TAS1R2Q8TE23 839 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 PARVBQ9HBI1 364 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 SORCS3Q9UPU3 1222 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 TPRKBQ9Y3C4 175 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 PCDHA3Q9Y5H8 950 aa20.64■□□□□ 0.89
RNF40-203ENST00000493683 CAMSAP1Q5T5Y3 1602 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 ALDH7A1P49419 539 aaKnown RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 ITGA1P56199 1179 aa20.63■□□□□ 0.89
RNF40-203ENST00000493683 RPS7P62081 194 aaKnown RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 GJC2Q5T442 439 aaPredicted RBP20.63■□□□□ 0.89
RNF40-203ENST00000493683 PGBD3Q8N328 593 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms