RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 CTNND2Q9UQB3 1225 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 RAD54BQ9Y620 910 aa15.37■□□□□ 0.05
ATG4B-223ENST00000493618 PIK3R2O00459 728 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 CISD3P0C7P0 127 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 GABRG2P18507 467 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 NTSR1P30989 418 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 LIMK1P53667 647 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 SLC8A3P57103 927 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 ADIGQ0VDE8 80 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 MAP7D1Q3KQU3 841 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 KIAA1211LQ6NV74 962 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 TRMT11Q7Z4G4 463 aaKnown RBP15.36■□□□□ 0.05
ATG4B-223ENST00000493618 C11orf74Q86VG3 221 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 DENND1CQ8IV53 801 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 CHPFQ8IZ52 775 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 NELFBQ8WX92 580 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 PIGKQ92643 395 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 DHTKD1Q96HY7 919 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-223ENST00000493618 SLC6A17Q9H1V8 727 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 MARCH2Q9P0N8 246 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 HESX1Q9UBX0 185 aa15.36■□□□□ 0.05
ATG4B-223ENST00000493618 AGO1Q9UL18 857 aaKnown RBP15.36■□□□□ 0.05
ATG4B-223ENST00000493618 ATXN2Q99700 1313 aaKnown RBP15.36■□□□□ 0.05
ATG4B-223ENST00000493618 A0A1W2PQF6 199 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 PPP1R3GB7ZBB8 358 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 XPO1O14980 1071 aaKnown RBP15.35■□□□□ 0.05
ATG4B-223ENST00000493618 ZBED1O96006 694 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 ADRB1P08588 477 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 LCP1P13796 627 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 BMP6P22004 513 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 RGS7P49802 495 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 BCAT1P54687 386 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 STX17P56962 302 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 YWHAEP62258 255 aaKnown RBP15.35■□□□□ 0.05
ATG4B-223ENST00000493618 COG7P83436 770 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 BST2Q10589 180 aaKnown RBP15.35■□□□□ 0.05
ATG4B-223ENST00000493618 FYB2Q5VWT5 728 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 TMEM270Q6UE05 265 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 LPCAT2Q7L5N7 544 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 BHLHA9Q7RTU4 235 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 ARHGAP18Q8N392 663 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 ZNF276Q8N554 614 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 KCNV2Q8TDN2 545 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 EDEM1Q92611 657 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 KAT5Q92993 513 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 CNTNAP3BQ96NU0 1288 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 CDK5RAP1Q96SZ6 601 aaKnown RBP15.35■□□□□ 0.05
ATG4B-223ENST00000493618 CNTNAP3Q9BZ76 1288 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 LRRC4Q9HBW1 653 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 METTL14Q9HCE5 456 aaKnown RBP15.35■□□□□ 0.05
ATG4B-223ENST00000493618 CACNA2D2Q9NY47 1150 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 CALCOCO1Q9P1Z2 691 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 SFMBT1Q9UHJ3 866 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 STARD13Q9Y3M8 1113 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 PCDHB4Q9Y5E5 795 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 NCOR2Q9Y618 2525 aa15.35■□□□□ 0.05
ATG4B-223ENST00000493618 PI4KAP42356 2102 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 LNP1A1A4G5 178 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 WASH3PC4AMC7 463 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 RNF225M0QZC1 329 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-223ENST00000493618 TM4SF5O14894 197 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 KHNYNO15037 678 aaKnown RBP15.34■□□□□ 0.05
ATG4B-223ENST00000493618 VDRP11473 427 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 TBXAS1P24557 533 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-223ENST00000493618 PTGER3P43115 390 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 PM20D1Q6GTS8 502 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 SDE2Q6IQ49 451 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 TTI2Q6NXR4 508 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 FMNL3Q8IVF7 1028 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 ARHGEF19Q8IW93 802 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 PPM1KQ8N3J5 372 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
ATG4B-223ENST00000493618 TFAP2BQ92481 460 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 CEP63Q96MT8 703 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 NT5C1BQ96P26 610 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 GTPBP4Q9BZE4 634 aaKnown RBP15.34■□□□□ 0.05
ATG4B-223ENST00000493618 DCLK3Q9C098 648 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 FAM124BQ9H5Z6 455 aaPredicted RBP15.34■□□□□ 0.05
ATG4B-223ENST00000493618 CD93Q9NPY3 652 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 STRIP2Q9ULQ0 834 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 CLEC4EQ9ULY5 219 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 ZNF510Q9Y2H8 683 aa15.34■□□□□ 0.05
ATG4B-223ENST00000493618 YJEFN3A6XGL0 299 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 E7ENQ6 273 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 O00370 1275 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 TSPAN3O60637 253 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 PENKP01210 267 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-223ENST00000493618 NDUFV2P19404 249 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 BRD2P25440 801 aaKnown RBP15.33■□□□□ 0.04
ATG4B-223ENST00000493618 MORC3Q14149 939 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 GEN1Q17RS7 908 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 RRAGAQ7L523 313 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 SIX6OS1Q8N1H7 587 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 IPO9Q96P70 1041 aaKnown RBP15.33■□□□□ 0.04
ATG4B-223ENST00000493618 ZSWIM1Q9BR11 485 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 TMEM74BQ9NUR3 256 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 CYP8B1Q9UNU6 501 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 CKAP5Q14008 2032 aa15.33■□□□□ 0.04
ATG4B-223ENST00000493618 SPTBN2O15020 2390 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms