RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 INCA1Q0VD86 236 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 PDK2Q15119 407 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 FAM187BQ17R55 369 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 FAM102AQ5T9C2 384 aaPredicted RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 ANGEL2Q5VTE6 544 aaKnown RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 DARS2Q6PI48 645 aaKnown RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 LRRC6Q86X45 466 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 LRRC71Q8N4P6 559 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 TTC39CQ8N584 583 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 CEP120Q8N960 986 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 TEKT4Q8WW24 435 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 LRRC39Q96DD0 335 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 FAM111AQ96PZ2 611 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 KLF6Q99612 283 aaPredicted RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 CALN1Q9BXU9 219 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 TRIM6Q9C030 488 aaPredicted RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 SMYD3Q9H7B4 428 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 USP29Q9HBJ7 922 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 ARL8BQ9NVJ2 186 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 CORO1CQ9ULV4 474 aaPredicted RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 LTBP3Q9NS15 1303 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 PLXNA1Q9UIW2 1896 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 TRDMT1O14717 391 aaKnown RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 ATP5BP06576 529 aaKnown RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 NFICP08651 508 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 CCNYL3P0C7X3 344 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 P4HA1P13674 534 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 BGNP21810 368 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 SLC26A2P50443 739 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 YWHAGP61981 247 aaKnown RBP eCLIP10.06□□□□□ -0.8
TSC1-207ENST00000493467 TNFAIP2Q03169 654 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 OVGP1Q12889 678 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 DALRD3Q5D0E6 543 aaKnown RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 TBCELQ5QJ74 424 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 NPNTQ6UXI9 565 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 C4orf22Q6V702 233 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 LILRB2Q8N423 598 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 MCUQ8NE86 351 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 TTC8Q8TAM2 541 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 RAB3IL1Q8TBN0 382 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 FAF2Q96CS3 445 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 C7orf26Q96N11 449 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 RNF157Q96PX1 679 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 C12orf65Q9H3J6 166 aaKnown RBP10.06□□□□□ -0.8
TSC1-207ENST00000493467 POPDC2Q9HBU9 364 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.06□□□□□ -0.8
TSC1-207ENST00000493467 HMGXB4Q9UGU5 601 aa10.06□□□□□ -0.8
TSC1-207ENST00000493467 A0A0G2JND7 137 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 BCLAF3A2AJT9 711 aaKnown RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 A6NHS1 94 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 COPEO14579 308 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 GSC2O15499 205 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 KLF4O43474 513 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 KRT37O76014 449 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 KRT19P08727 400 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 SNRPAP09012 282 aaKnown RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 MCF2P10911 925 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 HIRAP54198 1017 aaPredicted RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 CDH8P55286 799 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 POU5F1BQ06416 359 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 STILQ15468 1287 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 DBN1Q16643 649 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 SLC9A4Q6AI14 798 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 TRNP1Q6NT89 227 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 MAP7D3Q8IWC1 876 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.05□□□□□ -0.87e-10■■□□□ 14.3
TSC1-207ENST00000493467 AFG1LQ8WV93 481 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 TBCBQ99426 244 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 ASB7Q9H672 318 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 PRMT7Q9NVM4 692 aaPredicted RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 KCNK4Q9NYG8 393 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 BTBD7Q9P203 1132 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 STOML1Q9UBI4 398 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 KIAA1257Q9ULG3 409 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 RALGAPA2Q2PPJ7 1873 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 H7C0C1 242 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 FZD9O00144 591 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 B4GALT5O43286 388 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 PRPSAP2O60256 369 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 PIAS1O75925 651 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 ARIH2O95376 493 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 ITGB3P05106 788 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 SERPINB3P29508 390 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 MAGEA3P43357 314 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 ATP5OP48047 213 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 PTDSS1P48651 473 aaKnown RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 BOLA3Q53S33 107 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 CELF3Q5SZQ8 465 aaKnown RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 CCDC62Q6P9F0 684 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 LCLAT1Q6UWP7 414 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 FAM183BPQ6ZVS7 135 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 APLFQ8IW19 511 aaPredicted RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 KIRREL3Q8IZU9 778 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
TSC1-207ENST00000493467 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.05□□□□□ -0.8
TSC1-207ENST00000493467 RXFP2Q8WXD0 754 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms