RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PI4K2BG5E9Z4 385 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 TGM5O43548 720 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 LPXNO60711 386 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 CSPG5O95196 566 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 F9P00740 461 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 CSH1P0DML2 217 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 CSH2P0DML3 217 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 DNAJB1P25685 340 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 ATXN1P54253 815 aaKnown RBP14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 COPS2P61201 443 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 ERVK-21P61565 698 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 NME3Q13232 169 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 CASP8Q14790 479 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 VEPH1Q14D04 833 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 SLC13A5Q86YT5 568 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 KCTD6Q8NC69 237 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 CMASQ8NFW8 434 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 MICAL1Q8TDZ2 1067 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 RNF139Q8WU17 664 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 ARNTL2Q8WYA1 636 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 RAPGEF5Q92565 580 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 HSPH1Q92598 858 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 KLHL5Q96PQ7 755 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 ZNF576Q9H609 170 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 FAM204AQ9H8W3 233 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 TLR8Q9NR97 1041 aaKnown RBP14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 DDIT4Q9NX09 232 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 PSD3Q9NYI0 1048 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 MAGED2Q9UNF1 606 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 INSL5Q9Y5Q6 135 aa14.66□□□□□ -0.06
PDZRN3-210ENST00000492909 SYNJ2BP-COX16A0A087WUM0 186 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 RFXAPO00287 272 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 KRIT1O00522 736 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 MDM4O15151 490 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 RALAP11233 206 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 KLRC2P26717 231 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 PGFP49763 221 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 C2orf54Q08AI8 447 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 TAF12Q16514 161 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 TFDP3Q5H9I0 405 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 ERMARDQ5T6L9 678 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 FAM131BQ86XD5 332 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 ADAM32Q8TC27 787 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 DQX1Q8TE96 717 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 SNRNP25Q9BV90 132 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 ACBD3Q9H3P7 528 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 RBM12Q9NTZ6 932 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 PIGVQ9NUD9 493 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 CLIC5Q9NZA1 410 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 COX16Q9P0S2 106 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 GOLGA6L10A0A0M3HER8 536 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 HIDE1A8MVS5 230 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 GRM6O15303 877 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 SPATA31D3P0C874 917 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 KDELR1P24390 212 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 GBP1P32455 592 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 EPHB3P54753 998 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 TWF1Q12792 350 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 PLD1Q13393 1074 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 LLGL1Q15334 1064 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 MAP9Q49MG5 647 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 LILRA6Q6PI73 481 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 MFSD7Q6UXD7 560 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 SPOCD1Q6ZMY3 1216 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 SPATA31D4Q6ZUB0 917 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 SND1Q7KZF4 910 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 ADAT2Q7Z6V5 191 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 TAC4Q86UU9 113 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 MAP7D3Q8IWC1 876 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 PDZD8Q8NEN9 1154 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 EXOC4Q96A65 974 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 AP1M1Q9BXS5 423 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 OSBPL8Q9BZF1 889 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 SMOC2Q9H3U7 446 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 OSER1Q9NX31 292 aa14.65□□□□□ -0.06
PDZRN3-210ENST00000492909 ERICH4A6NGS2 130 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 C3orf70A6NLC5 250 aaPredicted RBP14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 H3BNC9 293 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 CCDC188H7C350 402 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 FSCN2O14926 492 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 GLUD1P00367 558 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 PTPN7P35236 360 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 CDKN2BP42772 138 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 CDH6P55285 790 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 GPM6BQ13491 265 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 CAMK1Q14012 370 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 GRIN2CQ14957 1233 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 PDK2Q15119 407 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 PPP2R5EQ16537 467 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 ZNF697Q5TEC3 545 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 PDE12Q6L8Q7 609 aaKnown RBP14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 CCDC149Q6ZUS6 474 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 CCDC185Q8N715 623 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 MAIP1Q8WWC4 291 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 OVCA2Q8WZ82 227 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 MYRFLQ96LU7 910 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 VIPAS39Q9H9C1 493 aa14.64□□□□□ -0.07
PDZRN3-210ENST00000492909 WDR6Q9NNW5 1121 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms