RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 VSTM4Q8IW00 320 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 DQX1Q8TE96 717 aaKnown RBP14.58□□□□□ -0.08
CCM2-217ENST00000492883 SYN2Q92777 582 aaPredicted RBP14.58□□□□□ -0.08
CCM2-217ENST00000492883 C11orf70Q9BRQ4 267 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 ADAM22Q9P0K1 906 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 NDRG2Q9UN36 371 aaKnown RBP14.58□□□□□ -0.08
CCM2-217ENST00000492883 SIT1Q9Y3P8 196 aa14.58□□□□□ -0.08
CCM2-217ENST00000492883 BZW2Q9Y6E2 419 aaKnown RBP14.58□□□□□ -0.08
CCM2-217ENST00000492883 DOCK8Q8NF50 2099 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 NCAM2O15394 837 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 GREM1O60565 184 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 ADH1CP00326 375 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 KLKB1P03952 638 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 GBP1P32455 592 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 GJA4P35212 333 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 TBX4P57082 545 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 CENPCQ03188 943 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 TRIP4Q15650 581 aaPredicted RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 TSR1Q2NL82 804 aaKnown RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 TDRD12Q587J7 1177 aaKnown RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 LY6G5CQ5SRR4 150 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 E4F1Q66K89 784 aaPredicted RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 ACAD10Q6JQN1 1059 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 RHBDF2Q6PJF5 856 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 SLC26A9Q7LBE3 791 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 ZNF571Q7Z3V5 609 aaPredicted RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 PHLDB2Q86SQ0 1253 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 UNC45BQ8IWX7 931 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 ADAM32Q8TC27 787 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 EXOC4Q96A65 974 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 SERPINB11Q96P15 392 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 SLC2A13Q96QE2 648 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 DDX23Q9BUQ8 820 aaKnown RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 FOXQ1Q9C009 403 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 LTB4R2Q9NPC1 389 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 AGO1Q9UL18 857 aaKnown RBP14.57□□□□□ -0.08
CCM2-217ENST00000492883 C5orf42Q9H799 3197 aa14.57□□□□□ -0.08
CCM2-217ENST00000492883 TMCO5BA8MYB1 307 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 AP5Z1O43299 807 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 TRUB2O95900 331 aaKnown RBP14.56□□□□□ -0.08
CCM2-217ENST00000492883 CYP17A1P05093 508 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 SERPING1P05155 500 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 TARSP26639 723 aaKnown RBP14.56□□□□□ -0.08
CCM2-217ENST00000492883 NOS2P35228 1153 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 CHKAP35790 457 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 SCNN1AP37088 669 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 GAD2Q05329 585 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 ANO4Q32M45 955 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 CWF19L1Q69YN2 538 aaKnown RBP14.56□□□□□ -0.08
CCM2-217ENST00000492883 PPP1R2P3Q6NXS1 205 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 TXNDC11Q6PKC3 985 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 Q6ZNB5 142 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 TPGS1Q6ZTW0 290 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 TAC4Q86UU9 113 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 VPS36Q86VN1 386 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 PHF13Q86YI8 300 aaPredicted RBP14.56□□□□□ -0.08
CCM2-217ENST00000492883 SYT11Q9BT88 431 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCM2-217ENST00000492883 FAM204AQ9H8W3 233 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 SPHK2Q9NRA0 654 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCM2-217ENST00000492883 WDR35Q9P2L0 1181 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 STAP1Q9ULZ2 295 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 TLR6Q9Y2C9 796 aa14.56□□□□□ -0.08
CCM2-217ENST00000492883 MTF2Q9Y483 593 aaPredicted RBP14.56□□□□□ -0.08
CCM2-217ENST00000492883 GREB1Q4ZG55 1949 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 SYNJ2BP-COX16A0A087WUM0 186 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 SHISA7A6NL88 538 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 PI15O43692 258 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 DAB1O75553 588 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 CALB1P05937 261 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 DCNP07585 359 aaKnown RBP14.55□□□□□ -0.08
CCM2-217ENST00000492883 ADH5P11766 374 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 AOC1P19801 751 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 AVPR2P30518 371 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 MATKP42679 507 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 SLC11A2P49281 568 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 GALK1P51570 392 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 RING1Q06587 406 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
CCM2-217ENST00000492883 NNTQ13423 1086 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 PON2Q15165 354 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 NUGGCQ68CJ6 796 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 TMC6Q7Z403 805 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 TMEM25Q86YD3 366 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 PJA1Q8NG27 643 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 OR8K1Q8NGG5 319 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 CD101Q93033 1021 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 RNF34Q969K3 372 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 P2RY13Q9BPV8 354 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 OSBPL6Q9BZF3 934 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 ZNHIT6Q9NWK9 470 aaKnown RBP14.55□□□□□ -0.08
CCM2-217ENST00000492883 DDIT4Q9NX09 232 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 RRN3Q9NYV6 651 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 COX16Q9P0S2 106 aa14.55□□□□□ -0.08
CCM2-217ENST00000492883 VCANP13611 3396 aa14.54□□□□□ -0.08
CCM2-217ENST00000492883 M0QYT0 321 aa14.54□□□□□ -0.08
CCM2-217ENST00000492883 DDX3XO00571 662 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCM2-217ENST00000492883 TRDMT1O14717 391 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms