RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 HOXA6P31267 233 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 GRIA2P42262 883 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 DMC1Q14565 340 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 EMC10Q5UCC4 262 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 SYT13Q7L8C5 426 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 DENND1CQ8IV53 801 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 CCDC33Q8N5R6 958 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 IRGQQ8WZA9 623 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 ACDQ96AP0 544 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 PLK2Q9NYY3 685 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 TMEM63CQ9P1W3 806 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 DEC1Q9P2X7 70 aa25.81■■□□□ 1.72
UPF3A-209ENST00000492270 PTPRZ1P23471 2315 aaPredicted RBP25.81■■□□□ 1.72
UPF3A-209ENST00000492270 HRO43593 1189 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 LTFP02788 710 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 TIE1P35590 1138 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 RPL34P49207 117 aaKnown RBP25.8■■□□□ 1.72
UPF3A-209ENST00000492270 LPAL2Q16609 132 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 STX1AQ16623 288 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 WDR5BQ86VZ2 330 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 DCLK2Q8N568 766 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 PLD4Q96BZ4 506 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 DCLK3Q9C098 648 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 DNAJC17Q9NVM6 304 aaKnown RBP25.8■■□□□ 1.72
UPF3A-209ENST00000492270 FANCLQ9NW38 375 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 FHOD1Q9Y613 1164 aa25.8■■□□□ 1.72
UPF3A-209ENST00000492270 A0A0A0MRY4 1105 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 FOXN3O00409 490 aaPredicted RBP25.79■■□□□ 1.72
UPF3A-209ENST00000492270 CACNG3O60359 315 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 FBXO21O94952 628 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 KRT31Q15323 416 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 TRIP4Q15650 581 aaPredicted RBP25.79■■□□□ 1.72
UPF3A-209ENST00000492270 MEA1Q16626 185 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 SCUBE3Q8IX30 993 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 ALLCQ8N6M5 410 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 TERB1Q8NA31 727 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 LSM14BQ9BX40 385 aaKnown RBP25.79■■□□□ 1.72
UPF3A-209ENST00000492270 VPS16Q9H269 839 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 ANO10Q9NW15 660 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 WDR35Q9P2L0 1181 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 TJP2Q9UDY2 1190 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 ZNF510Q9Y2H8 683 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 RALGAPA1Q6GYQ0 2036 aa25.79■■□□□ 1.72
UPF3A-209ENST00000492270 E5RJQ4 531 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 CLCN1P35523 988 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 KIR2DL1P43626 348 aaPredicted RBP25.78■■□□□ 1.72
UPF3A-209ENST00000492270 GRAMD4Q6IC98 578 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 MSANTD2Q6P1R3 559 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 PRR23BQ6ZRT6 265 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 TOGARAM2Q6ZUX3 1019 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 PASD1Q8IV76 773 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 CCDC26Q8TAB7 109 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 HINFPQ9BQA5 517 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 SLC4A5Q9BY07 1137 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 MMP17Q9ULZ9 603 aa25.78■■□□□ 1.72
UPF3A-209ENST00000492270 HBS1LQ9Y450 684 aaKnown RBP25.78■■□□□ 1.72
UPF3A-209ENST00000492270 TBC1D3BA6NDS4 549 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 KLF8O95600 359 aaPredicted RBP25.77■■□□□ 1.72
UPF3A-209ENST00000492270 FYNP06241 537 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 TNFRSF4P43489 277 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 MRPS21P82921 87 aaKnown RBP25.77■■□□□ 1.72
UPF3A-209ENST00000492270 RAPGEF1Q13905 1077 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 C10orf76Q5T2E6 689 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 KLHDC7AQ5VTJ3 777 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 FYB2Q5VWT5 728 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 SLC47A2Q86VL8 602 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 WDTC1Q8N5D0 677 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 IL17RCQ8NAC3 791 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 TXNDC5Q8NBS9 432 aaKnown RBP25.77■■□□□ 1.72
UPF3A-209ENST00000492270 XPO6Q96QU8 1125 aaKnown RBP25.77■■□□□ 1.72
UPF3A-209ENST00000492270 HCN2Q9UL51 889 aa25.77■■□□□ 1.72
UPF3A-209ENST00000492270 PAPSS1O43252 624 aaPredicted RBP25.76■■□□□ 1.71
UPF3A-209ENST00000492270 HNRNPLP14866 589 aaKnown RBP eCLIP25.76■■□□□ 1.71
UPF3A-209ENST00000492270 ACADSBP45954 432 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 KLK7P49862 253 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 PDCLQ13371 301 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 SIM2Q14190 667 aaPredicted RBP25.76■■□□□ 1.71
UPF3A-209ENST00000492270 DRAP1Q14919 205 aaPredicted RBP25.76■■□□□ 1.71
UPF3A-209ENST00000492270 CAMKK1Q8N5S9 505 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 STK32AQ8WU08 396 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 RUBCNQ92622 972 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 GOLGA1Q92805 767 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 FAM149B1Q96BN6 582 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 PCDHGC3Q9UN70 934 aa25.76■■□□□ 1.71
UPF3A-209ENST00000492270 SGK1O00141 431 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 PENKP01210 267 aaPredicted RBP25.75■■□□□ 1.71
UPF3A-209ENST00000492270 CISD3P0C7P0 127 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 NCAM1P13591 858 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 CHKAP35790 457 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 DGKGP49619 791 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 MYL5Q02045 173 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 PTK2Q05397 1052 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 TMEM92Q6UXU6 159 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 TMEM110Q86TL2 294 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 FAM217AQ8IXS0 508 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 FAM71AQ8IYT1 594 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 PIWIL1Q96J94 861 aaKnown RBP25.75■■□□□ 1.71
UPF3A-209ENST00000492270 NAA15Q9BXJ9 866 aaKnown RBP25.75■■□□□ 1.71
UPF3A-209ENST00000492270 PLCB1Q9NQ66 1216 aa25.75■■□□□ 1.71
UPF3A-209ENST00000492270 NCDNQ9UBB6 729 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms