RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 DGKQP52824 942 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 BFSP2Q13515 415 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 CSHL1Q14406 222 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 ACOX1Q15067 660 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 TRIM71Q2Q1W2 868 aaKnown RBP4.52□□□□□ -1.69
VTA1-204ENST00000491881 TMEM196Q5HYL7 178 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 KLHL17Q6TDP4 642 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 SPATA5Q8NB90 893 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 WDR60Q8WVS4 1066 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 KATNAL1Q9BW62 490 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 MAGEH1Q9H213 219 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 CPNE5Q9HCH3 593 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 IL17RBQ9NRM6 502 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 SEMA4GQ9NTN9 838 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 TFCP2L1Q9NZI6 479 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 LPAR3Q9UBY5 353 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 ENTPD2Q9Y5L3 495 aa4.52□□□□□ -1.69
VTA1-204ENST00000491881 COL3A1P02461 1466 aaPredicted RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 MGST3O14880 152 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 CA12O43570 354 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 PDE8BO95263 885 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 FGAP02671 866 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 ANXA6P08133 673 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 MYCLP12524 364 aaPredicted RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 FPR3P25089 353 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 HALP42357 657 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 CACNA2D1P54289 1103 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 POLE2P56282 527 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 TXNL4AP83876 142 aaKnown RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 PRKG1Q13976 671 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 INO80DQ53TQ3 878 aaPredicted RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 ATPAF1Q5TC12 328 aaPredicted RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 RINT1Q6NUQ1 792 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 CEP85Q6P2H3 762 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 NAPRTQ6XQN6 538 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 KRT27Q7Z3Y8 459 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 CCDC117Q8IWD4 279 aaPredicted RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 SFTPA1Q8IWL2 248 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 TRAPPC12Q8WVT3 735 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 CTHRC1Q96CG8 243 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 UROC1Q96N76 676 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 LENG8Q96PV6 779 aaPredicted RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 TP63Q9H3D4 680 aaPredicted RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 AGO4Q9HCK5 861 aaKnown RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 GRHPRQ9UBQ7 328 aa4.51□□□□□ -1.69
VTA1-204ENST00000491881 SCAF8Q9UPN6 1271 aaKnown RBP4.51□□□□□ -1.69
VTA1-204ENST00000491881 LRRC3CA6NJW4 275 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 DNPH1O43598 174 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 EXOC3O60645 756 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 CBFA2T3O75081 653 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 TAF5LO75529 589 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 HNRNPCP07910 306 aaKnown RBP eCLIP4.5□□□□□ -1.693e-9■□□□□ 9.7
VTA1-204ENST00000491881 GPD1P21695 349 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 KLRK1P26718 216 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 MCM5P33992 734 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 DIO1P49895 249 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 CCDC15Q0P6D6 951 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 FOXO1Q12778 655 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 MTAPQ13126 283 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 SEMA3BQ13214 749 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 FHL3Q13643 280 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 AASDHQ4L235 1098 aaPredicted RBP4.5□□□□□ -1.69
VTA1-204ENST00000491881 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 SULT6B1Q6IMI4 303 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 GRHL2Q6ISB3 625 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 KIRREL2Q6UWL6 708 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 AMIGO2Q86SJ2 522 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 CLASRPQ8N2M8 674 aaKnown RBP4.5□□□□□ -1.69
VTA1-204ENST00000491881 NKAPQ8N5F7 415 aaKnown RBP4.5□□□□□ -1.69
VTA1-204ENST00000491881 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.5□□□□□ -1.69
VTA1-204ENST00000491881 PNPLA1Q8N8W4 532 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 FAM71DQ8N9W8 422 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 RUBCNQ92622 972 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 EID2BQ96D98 161 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 DAZAP1Q96EP5 407 aaKnown RBP4.5□□□□□ -1.69
VTA1-204ENST00000491881 SCLT1Q96NL6 688 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 MMS19Q96T76 1030 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 RTKNQ9BST9 563 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
VTA1-204ENST00000491881 SORBS1Q9BX66 1292 aaKnown RBP4.5□□□□□ -1.69
VTA1-204ENST00000491881 CIPCQ9C0C6 399 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 USP29Q9HBJ7 922 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 FSCN3Q9NQT6 498 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 FBXO28Q9NVF7 368 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 ASB6Q9NWX5 421 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 HERC5Q9UII4 1024 aaKnown RBP4.5□□□□□ -1.69
VTA1-204ENST00000491881 NFU1Q9UMS0 254 aa4.5□□□□□ -1.69
VTA1-204ENST00000491881 LOC102724159A0A0B4J2E5 919 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 HMX3A6NHT5 357 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 IKBKBO14920 756 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 PIP5K1CO60331 668 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 C1QL1O75973 258 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 ACTL6BO94805 426 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 GYS1P13807 737 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 MMP8P22894 467 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 PPM1FP49593 454 aaPredicted RBP4.49□□□□□ -1.69
VTA1-204ENST00000491881 ZNF81P51508 661 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 COPB1P53618 953 aaKnown RBP4.49□□□□□ -1.69
VTA1-204ENST00000491881 SOX10P56693 466 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 CYP4F2P78329 520 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms