RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ETFBKMTQ8IXQ9 262 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 FRMD1Q8N878 549 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 NAT16Q8N8M0 369 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 C12orf50Q8NA57 414 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 IL17RCQ8NAC3 791 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 TXNDC5Q8NBS9 432 aaKnown RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 PDZD8Q8NEN9 1154 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 TATDN2Q93075 761 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 P2RY11Q96G91 374 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 HEXIM2Q96MH2 286 aaKnown RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 PNKPQ96T60 521 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 CRACR2AQ9BSW2 395 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 NT5C1AQ9BXI3 368 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 INTS2Q9H0H0 1204 aaKnown RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 CSNK1G1Q9HCP0 422 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 ARHGEF4Q9NR80 690 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 HCN2Q9UL51 889 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 PCDHGA5Q9Y5G8 931 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 E2F8A0AVK6 867 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 PATE3B3GLJ2 98 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 TM4SF5O14894 197 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 MDM4O15151 490 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 TBX18O95935 607 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 ADH1CP00326 375 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 APODP05090 189 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 PON1P27169 355 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 GBP1P32455 592 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 EIF2DP41214 584 aaKnown RBP11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 TUBP50607 506 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 LIMK1P53667 647 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 SLC8A3P57103 927 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 GCNT1Q02742 428 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 CREB5Q02930 508 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 INCA1Q0VD86 236 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 CUL2Q13617 745 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 MIIPQ5JXC2 388 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 STPG1Q5TH74 334 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 PMS2CLQ68D20 193 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 C11orf74Q86VG3 221 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 TMEM25Q86YD3 366 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 FMNL3Q8IVF7 1028 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 CRYBG2Q8N1P7 616 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 RLN3Q8WXF3 142 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 NMUR1Q9HB89 426 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 CISHQ9NSE2 258 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 NUDT5Q9UKK9 219 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 SH3BP1Q9Y3L3 701 aa11.59□□□□□ -0.55
TMEM39A-211ENST00000491685 BCLAF3A2AJT9 711 aaKnown RBP11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 LGALS16A8MUM7 142 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 HOXC11O43248 304 aaPredicted RBP11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 TLR5O60602 858 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 TULP3O75386 442 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 CCDC172P0C7W6 258 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 CD58P19256 250 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 SLC9A1P19634 815 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 BPIFB4P59827 614 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 MRPS21P82921 87 aaKnown RBP11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 FANCCQ00597 558 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 GSE1Q14687 1217 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 ELF2Q15723 593 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 IL31Q6EBC2 164 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 TRIM65Q6PJ69 517 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 NUDT18Q6ZVK8 323 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 RRAGAQ7L523 313 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 MIB1Q86YT6 1006 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 NEK11Q8NG66 645 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 OLIG1Q8TAK6 271 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 LMO3Q8TAP4 145 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 ERLEC1Q96DZ1 483 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 TMEM176AQ96HP8 235 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 EDEM2Q9BV94 578 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 NUP58Q9BVL2 599 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 VPS45Q9NRW7 570 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 APEX2Q9UBZ4 518 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 DNAJC12Q9UKB3 198 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 PCDHB4Q9Y5E5 795 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 PCDH15Q96QU1 1955 aa11.58□□□□□ -0.56
TMEM39A-211ENST00000491685 A0A0A0MRY4 1105 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 A0A1W2PQH9 124 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 LNP1A1A4G5 178 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 RHOBTB1O94844 696 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 PROS1P07225 676 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 FAM200BP0CF97 657 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 GRIA2P42262 883 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 WASP42768 502 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 GAD2Q05329 585 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 PTK2Q05397 1052 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 USP39Q53GS9 565 aaKnown RBP11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 N4BP2L1Q5TBK1 243 aaPredicted RBP11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 ARMCX6Q7L4S7 300 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 RNF214Q8ND24 703 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 CYFIP2Q96F07 1278 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 HNRNPABQ99729 332 aaKnown RBP11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 ARID3AQ99856 593 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 PLCB1Q9NQ66 1216 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 CYLDQ9NQC7 956 aa11.57□□□□□ -0.56
TMEM39A-211ENST00000491685 SPHK2Q9NRA0 654 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms