RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TKTL1P51854 596 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 ZNF132P52740 706 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 LMNB2Q03252 620 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 EFEMP1Q12805 493 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 KRT31Q15323 416 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 CCDC6Q16204 474 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 CSRP2Q16527 193 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 ANO4Q32M45 955 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 PLK5Q496M5 336 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 SGO2Q562F6 1265 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 FKBP15Q5T1M5 1219 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 TMEM270Q6UE05 265 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 TOGARAM2Q6ZUX3 1019 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 RRAGAQ7L523 313 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 CACNA2D4Q7Z3S7 1137 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 TXNDC5Q8NBS9 432 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 TSTD1Q8NFU3 115 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 NDST4Q9H3R1 872 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 INVSQ9Y283 1065 aa13.31□□□□□ -0.28
SEC61A1-206ENST00000491668 RALGAPA1Q6GYQ0 2036 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 NEDD8-MDP1E9PL57 170 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 GDF9O60383 454 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ZBED1O96006 694 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 VDRP11473 427 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ATP1A3P13637 1013 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 TYRP14679 529 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 CD19P15391 556 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 TBXAS1P24557 533 aaPredicted RBP13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 COPB1P53618 953 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 BCAT1P54687 386 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 YWHAGP61981 247 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ADIGQ0VDE8 80 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 PUM1Q14671 1186 aaKnown RBP eCLIP13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ANO7Q6IWH7 933 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 LCLAT1Q6UWP7 414 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 TPGS1Q6ZTW0 290 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ERMP1Q7Z2K6 904 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 PPM1KQ8N3J5 372 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 TERB1Q8NA31 727 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 CCDC26Q8TAB7 109 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 OLIG1Q8TAK6 271 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 SLC35F5Q8WV83 523 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 NT5C1BQ96P26 610 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ACOX2Q99424 681 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 BBS2Q9BXC9 721 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 TPSD1Q9BZJ3 242 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 DNAI2Q9GZS0 605 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 ARRDC1-AS1Q9H2J1 176 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 CD248Q9HCU0 757 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 RXFP3Q9NSD7 469 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 DEC1Q9P2X7 70 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 LIMA1Q9UHB6 759 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
SEC61A1-206ENST00000491668 MED19A0JLT2 244 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 TBC1D3BA6NDS4 549 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 YJEFN3A6XGL0 299 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PRRT4C9JH25 899 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 E7ENQ6 273 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 P4HA2O15460 535 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 EPN2O95208 641 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 TPM3P06753 285 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 HMBSP08397 361 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PAEPP09466 180 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 RALAP11233 206 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 BCKDHBP21953 392 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 BRD2P25440 801 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 DGKEP52429 567 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 UBXN1Q04323 297 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 SF3A2Q15428 464 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PLA2G2CQ5R387 149 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 BTBD8Q5XKL5 378 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PMF1Q6P1K2 205 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PRR23CQ6ZRP0 262 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 FRMD1Q8N878 549 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 KCTD13Q8WZ19 329 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 BHMTQ93088 406 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 LOXL4Q96JB6 756 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 RBSNQ9H1K0 784 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 HSD3B7Q9H2F3 369 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 SMOC1Q9H4F8 434 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 DNAJC17Q9NVM6 304 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 MARCH2Q9P0N8 246 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 RASAL2Q9UJF2 1139 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 LSM7Q9UK45 103 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 FBXO10Q9UK96 956 aa13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 AGO1Q9UL18 857 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEC61A1-206ENST00000491668 CNTN6Q9UQ52 1028 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms