RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 RAD54BQ9Y620 910 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 MUC22E2RYF6 1773 aaPredicted RBP16.5■□□□□ 0.23
SMPD4-220ENST00000491319 CACNA1EQ15878 2313 aa16.5■□□□□ 0.23
SMPD4-220ENST00000491319 TULP2O00295 520 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 GIPC1O14908 333 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 SLC16A3O15427 465 aaKnown RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 CISD3P0C7P0 127 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 NDUFV2P19404 249 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 CORO1AP31146 461 aaKnown RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 NOVA1P51513 510 aaKnown RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 BYSLQ13895 437 aaKnown RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 GOLGA7BQ2TAP0 167 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 COBLL1Q53SF7 1204 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 RAB41Q5JT25 222 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 DAB2IPQ5VWQ8 1189 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 LYSMD4Q5XG99 296 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 ANKRD40Q6AI12 368 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 SYT12Q8IV01 421 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 DEFB119Q8N690 84 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 GSDMAQ96QA5 445 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 CDK5RAP1Q96SZ6 601 aaKnown RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 GABRG3Q99928 467 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 SLC6A17Q9H1V8 727 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 CD93Q9NPY3 652 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 CACNA2D2Q9NY47 1150 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 EVLQ9UI08 416 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-220ENST00000491319 COQ4Q9Y3A0 265 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
SMPD4-220ENST00000491319 ITPKAP23677 461 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 TKTL1P51854 596 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 YWHAGP61981 247 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMPD4-220ENST00000491319 COG7P83436 770 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 RPL6Q02878 288 aaKnown RBP16.48■□□□□ 0.23
SMPD4-220ENST00000491319 CUL2Q13617 745 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 FYB2Q5VWT5 728 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
SMPD4-220ENST00000491319 ANKRD52Q8NB46 1076 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 ENGASEQ8NFI3 743 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 NDRG1Q92597 394 aaKnown RBP16.48■□□□□ 0.23
SMPD4-220ENST00000491319 ULBP1Q9BZM6 244 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 FAM124BQ9H5Z6 455 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-220ENST00000491319 MARCH2Q9P0N8 246 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 TSPAN16Q9UKR8 245 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 ANGPTL2Q9UKU9 493 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 ZNF510Q9Y2H8 683 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 USP24Q9UPU5 2620 aa16.48■□□□□ 0.23
SMPD4-220ENST00000491319 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 WASH3PC4AMC7 463 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 AP5Z1O43299 807 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 PENKP01210 267 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-220ENST00000491319 BCAT1P54687 386 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
SMPD4-220ENST00000491319 PDE4CQ08493 712 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 NUMA1Q14980 2115 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 UAP1L1Q3KQV9 507 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 SPDYCQ5MJ68 293 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 SH3PXD2AQ5TCZ1 1133 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 PEAR1Q5VY43 1037 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-220ENST00000491319 SDE2Q6IQ49 451 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 BHLHA9Q7RTU4 235 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 DENND1CQ8IV53 801 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 ARHGAP18Q8N392 663 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 SPATA20Q8TB22 786 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 SMARCE1Q969G3 411 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 SLC35C1Q96A29 364 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
SMPD4-220ENST00000491319 UBXN6Q9BZV1 441 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 FBXO10Q9UK96 956 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 AGO1Q9UL18 857 aaKnown RBP16.47■□□□□ 0.23
SMPD4-220ENST00000491319 CYP8B1Q9UNU6 501 aa16.47■□□□□ 0.23
SMPD4-220ENST00000491319 NYNRINQ9P2P1 1898 aaKnown RBP16.46■□□□□ 0.23
SMPD4-220ENST00000491319 TP53BP1Q12888 1972 aaPredicted RBP16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SLC12A8A0AV02 714 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 XPO1O14980 1071 aaKnown RBP16.46■□□□□ 0.23
SMPD4-220ENST00000491319 KRT37O76014 449 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SMC2O95347 1197 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 ZBED1O96006 694 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 CD19P15391 556 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 CHKAP35790 457 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 MAPK8P45983 427 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 MFAP3P55082 362 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SLC8A3P57103 927 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SHC2P98077 582 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 ADIGQ0VDE8 80 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 LMAN2Q12907 356 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 LRMPQ12912 555 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 GEN1Q17RS7 908 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SGO2Q562F6 1265 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SLC36A4Q6YBV0 504 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 SLC41A1Q8IVJ1 513 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 UBR7Q8N806 425 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 MRGPRX1Q96LB2 322 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 DCLK3Q9C098 648 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 FSCN3Q9NQT6 498 aa16.46■□□□□ 0.23
SMPD4-220ENST00000491319 ARMCX3Q9UH62 379 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms