RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SYPL2Q5VXT5 272 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 NUGGCQ68CJ6 796 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 DNAJC24Q6P3W2 148 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 OSCP1Q8WVF1 389 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 ANP32BQ92688 251 aaKnown RBP16.52■□□□□ 0.24
TRA2A-208ENST00000490942 LRRC3BQ96PB8 259 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 NPY6RQ99463 290 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 FAM83CQ9BQN1 747 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 RPP25Q9BUL9 199 aaKnown RBP16.52■□□□□ 0.24
TRA2A-208ENST00000490942 DDX23Q9BUQ8 820 aaKnown RBP16.52■□□□□ 0.24
TRA2A-208ENST00000490942 SELENOOQ9BVL4 669 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 PLA2G2FQ9BZM2 168 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 SMG9Q9H0W8 520 aaKnown RBP16.52■□□□□ 0.24
TRA2A-208ENST00000490942 MRPL47Q9HD33 250 aaKnown RBP16.52■□□□□ 0.24
TRA2A-208ENST00000490942 CD320Q9NPF0 282 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 RASAL2Q9UJF2 1139 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 TLR6Q9Y2C9 796 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 SH3BP1Q9Y3L3 701 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 PAXBP1Q9Y5B6 917 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 SCINQ9Y6U3 715 aa16.52■□□□□ 0.24
TRA2A-208ENST00000490942 TCF20Q9UGU0 1960 aaKnown RBP16.51■□□□□ 0.23
TRA2A-208ENST00000490942 ZNF263O14978 683 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 TRUB2O95900 331 aaKnown RBP16.51■□□□□ 0.23
TRA2A-208ENST00000490942 ASGR2P07307 311 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 SLC2A3P11169 496 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 RRM1P23921 792 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 PTPN9P43378 593 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 GFPT1Q06210 699 aaPredicted RBP16.51■□□□□ 0.23
TRA2A-208ENST00000490942 SLC25A52Q3SY17 297 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 CCDC122Q5T0U0 273 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 BNIPLQ7Z465 357 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 MIB1Q86YT6 1006 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 UNC45BQ8IWX7 931 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 FNIP1Q8TF40 1166 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 RSAD2Q8WXG1 361 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 MSANTD3Q96H12 275 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 SLC39A13Q96H72 371 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 NECAB3Q96P71 396 aaPredicted RBP16.51■□□□□ 0.23
TRA2A-208ENST00000490942 LUC7LQ9NQ29 371 aaKnown RBP16.51■□□□□ 0.23
TRA2A-208ENST00000490942 SMPD4Q9NXE4 827 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 CFAP97Q9P2B7 532 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 STOML2Q9UJZ1 356 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 NUDT5Q9UKK9 219 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 INTUQ9ULD6 942 aa16.51■□□□□ 0.23
TRA2A-208ENST00000490942 SLC12A8A0AV02 714 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 C2CD4BA6NLJ0 364 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 TMCO5BA8MYB1 307 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 GOLGA8SH3BPF8 625 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 ARNTLO00327 626 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 IRAK2O43187 625 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 GREM1O60565 184 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 STC2O76061 302 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 ENDOD1O94919 500 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 ALADP13716 330 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 GLULP15104 373 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 CYLC1P35663 651 aaPredicted RBP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 FLT3P36888 993 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 HARS2P49590 506 aaKnown RBP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 MAMLD1Q13495 774 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 PPP2R5DQ14738 602 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 ACBD5Q5T8D3 534 aaPredicted RBP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 C1orf228Q6PIY5 440 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 Q6ZNB5 142 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 BAG1Q99933 345 aaPredicted RBP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 BRD9Q9H8M2 597 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 METTL5Q9NRN9 209 aaKnown RBP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 GKN1Q9NS71 199 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 WNT16Q9UBV4 365 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 CNOT8Q9UFF9 292 aaKnown RBP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 LCMT1Q9UIC8 334 aa16.5■□□□□ 0.23
TRA2A-208ENST00000490942 HELZP42694 1942 aaKnown RBP16.5■□□□□ 0.23
TRA2A-208ENST00000490942 MDM4O15151 490 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 GRAP2O75791 330 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 H2AFZP0C0S5 128 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 DESP17661 470 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 GDI1P31150 447 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 SDC4P31431 198 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 IFNAR2P48551 515 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 TBX4P57082 545 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 GPC5P78333 572 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 DCUN1D2Q6PH85 259 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 H2AFVQ71UI9 128 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 STRADAQ7RTN6 431 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 FAM217AQ8IXS0 508 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 SPC24Q8NBT2 197 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 CCDC112Q8NEF3 446 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 RIN3Q8TB24 985 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 CENPIQ92674 756 aaPredicted RBP16.49■□□□□ 0.23
TRA2A-208ENST00000490942 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 ZNF653Q96CK0 615 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 NCAPGQ9BPX3 1015 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 FAM204AQ9H8W3 233 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 DUS2Q9NX74 493 aaKnown RBP16.49■□□□□ 0.23
TRA2A-208ENST00000490942 SFMBT1Q9UHJ3 866 aa16.49■□□□□ 0.23
TRA2A-208ENST00000490942 KIF26AQ9ULI4 1882 aaPredicted RBP16.49■□□□□ 0.23
TRA2A-208ENST00000490942 EIF3CLB5ME19 914 aaKnown RBP16.48■□□□□ 0.23
TRA2A-208ENST00000490942 DCXO43602 365 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms