RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PLK2Q9NYY3 685 aa32.84■■■□□ 2.85
LDB1-204ENST00000490751 DCLK1O15075 740 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 ADAM23O75077 832 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 KRT5P13647 590 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 DAOAP59103 153 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 DENND1CQ8IV53 801 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 SCML4Q8N228 414 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 RNF139Q8WU17 664 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 EDEM1Q92611 657 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 LOXL4Q96JB6 756 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 ZC3H10Q96K80 434 aaKnown RBP32.83■■■□□ 2.85
LDB1-204ENST00000490751 CRACR2AQ9BSW2 395 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 UBE2TQ9NPD8 197 aaPredicted RBP32.83■■■□□ 2.85
LDB1-204ENST00000490751 AGO1Q9UL18 857 aaKnown RBP32.83■■■□□ 2.85
LDB1-204ENST00000490751 CNTN6Q9UQ52 1028 aa32.83■■■□□ 2.85
LDB1-204ENST00000490751 SDK1Q7Z5N4 2213 aa32.82■■■□□ 2.85
LDB1-204ENST00000490751 PIK3R2O00459 728 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 GABBR2O75899 941 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 ALDH1A2O94788 518 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 CHKAP35790 457 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 CSRP2Q16527 193 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 PLK5Q496M5 336 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 TOGARAM2Q6ZUX3 1019 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 IRF2BP1Q8IU81 584 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 FMNL3Q8IVF7 1028 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 KCNV2Q8TDN2 545 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 PLD4Q96BZ4 506 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 P2RY11Q96G91 374 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 POLMQ9NP87 494 aaPredicted RBP32.82■■■□□ 2.84
LDB1-204ENST00000490751 ABCC13Q9NSE7 274 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 DLL3Q9NYJ7 618 aa32.82■■■□□ 2.84
LDB1-204ENST00000490751 DYNC1LI1Q9Y6G9 523 aaKnown RBP32.82■■■□□ 2.84
LDB1-204ENST00000490751 PRR5-ARHGAP8B1AHC4 643 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 EPN2O95208 641 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 DGKGP49619 791 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 ARHGAP8P85298 464 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 PUM1Q14671 1186 aaKnown RBP eCLIP32.81■■■□□ 2.845e-6■□□□□ 10.2
LDB1-204ENST00000490751 TRMT11Q7Z4G4 463 aaKnown RBP32.81■■■□□ 2.84
LDB1-204ENST00000490751 NUP62CLQ9H1M0 184 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 ARRDC1-AS1Q9H2J1 176 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 SFMBT1Q9UHJ3 866 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 HCN2Q9UL51 889 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 INVSQ9Y283 1065 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 STARD13Q9Y3M8 1113 aa32.81■■■□□ 2.84
LDB1-204ENST00000490751 TPD52L1Q16890 204 aaPredicted RBP32.8■■■□□ 2.84
LDB1-204ENST00000490751 USP39Q53GS9 565 aaKnown RBP32.8■■■□□ 2.84
LDB1-204ENST00000490751 FYB2Q5VWT5 728 aa32.8■■■□□ 2.84
LDB1-204ENST00000490751 TRIM65Q6PJ69 517 aa32.8■■■□□ 2.84
LDB1-204ENST00000490751 PRR23CQ6ZRP0 262 aa32.8■■■□□ 2.84
LDB1-204ENST00000490751 HSFY1Q96LI6 401 aa32.8■■■□□ 2.84
LDB1-204ENST00000490751 DUSP15Q9H1R2 295 aaPredicted RBP32.8■■■□□ 2.84
LDB1-204ENST00000490751 PRRT4C9JH25 899 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 PENKP01210 267 aaPredicted RBP32.79■■■□□ 2.84
LDB1-204ENST00000490751 CISD3P0C7P0 127 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 MTIF2P46199 727 aaKnown RBP32.79■■■□□ 2.84
LDB1-204ENST00000490751 TRIP4Q15650 581 aaPredicted RBP32.79■■■□□ 2.84
LDB1-204ENST00000490751 ELF2Q15723 593 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 DPCR1Q3MIW9 517 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 EGFLAMQ63HQ2 1017 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 GJB7Q6PEY0 223 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 ENOSF1Q7L5Y1 443 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 ERMP1Q7Z2K6 904 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 IRGQQ8WZA9 623 aa32.79■■■□□ 2.84
LDB1-204ENST00000490751 HBS1LQ9Y450 684 aaKnown RBP32.79■■■□□ 2.84
LDB1-204ENST00000490751 SLC9A1P19634 815 aa32.78■■■□□ 2.84
LDB1-204ENST00000490751 GBP1P32455 592 aa32.78■■■□□ 2.84
LDB1-204ENST00000490751 GBP6Q6ZN66 633 aa32.78■■■□□ 2.84
LDB1-204ENST00000490751 CLEC17AQ6ZS10 378 aa32.78■■■□□ 2.84
LDB1-204ENST00000490751 CPXM2Q8N436 756 aa32.78■■■□□ 2.84
LDB1-204ENST00000490751 CLEC4CQ8WTT0 213 aa32.78■■■□□ 2.84
LDB1-204ENST00000490751 BCCIPQ9P287 314 aaKnown RBP eCLIP32.78■■■□□ 2.84
LDB1-204ENST00000490751 FBXO10Q9UK96 956 aa32.78■■■□□ 2.84
LDB1-204ENST00000490751 CDV3Q9UKY7 258 aaKnown RBP32.78■■■□□ 2.84
LDB1-204ENST00000490751 TCRBV21S2A2A0A5A6 115 aa32.77■■■□□ 2.84
LDB1-204ENST00000490751 WASP42768 502 aa32.77■■■□□ 2.84
LDB1-204ENST00000490751 MFAP3P55082 362 aa32.77■■■□□ 2.84
LDB1-204ENST00000490751 CCDC6Q16204 474 aa32.77■■■□□ 2.84
LDB1-204ENST00000490751 HMGB4Q8WW32 186 aa32.77■■■□□ 2.84
LDB1-204ENST00000490751 MSI1O43347 362 aaKnown RBP32.76■■■□□ 2.83
LDB1-204ENST00000490751 RHOBTB1O94844 696 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 HOXB2P14652 356 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 SDHBP21912 280 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 NTSR1P30989 418 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 HARS2P49590 506 aaKnown RBP32.76■■■□□ 2.83
LDB1-204ENST00000490751 APBA1Q02410 837 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 EXOC3L4Q17RC7 722 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 DGLUCYQ7Z3D6 616 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 FAM217AQ8IXS0 508 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 FAM81BQ96LP2 452 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 ACOX2Q99424 681 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 MIS12Q9H081 205 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 THAP9Q9H5L6 903 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 APEX2Q9UBZ4 518 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 PCDHGA5Q9Y5G8 931 aa32.76■■■□□ 2.83
LDB1-204ENST00000490751 FBXO21O94952 628 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 LETM1O95202 739 aaPredicted RBP32.75■■■□□ 2.83
LDB1-204ENST00000490751 LTFP02788 710 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 CYBBP04839 570 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 GPD2P43304 727 aa32.75■■■□□ 2.83
LDB1-204ENST00000490751 ARHGAP44Q17R89 818 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms