RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 BOP1Q14137 746 aaKnown RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 DLGAP5Q15398 846 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 LMBRD2Q68DH5 695 aaPredicted RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TMEM132EQ6IEE7 984 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 HACE1Q8IYU2 909 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TXLNBQ8N3L3 684 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 GLMPQ8WWB7 406 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TMEM176AQ96HP8 235 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 RADILQ96JH8 1075 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 PRPF18Q99633 342 aaKnown RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 HGH1Q9BTY7 390 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TUBB2BQ9BVA1 445 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TMEM74BQ9NUR3 256 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TBCCD1Q9NVR7 557 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 HCFC1R1Q9NWW0 138 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.23□□□□□ -1.896e-7■□□□□ 8.6
UBXN4-208ENST00000490163 MTRRQ9UBK8 725 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TUBE1Q9UJT0 475 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 ITGB1BP2Q9UKP3 347 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 NAP1L2Q9ULW6 460 aaPredicted RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 MAGED2Q9UNF1 606 aaPredicted RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 AGAP1Q9UPQ3 857 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 CDY1Q9Y6F8 540 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 DENND4BO75064 1496 aaPredicted RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 POGZQ7Z3K3 1410 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 LAMC1P11047 1609 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 OR2A25A4D2G3 310 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 GUCY1B2O75343 617 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 ENTPD3O75355 529 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 ALX3O95076 343 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 HSPA4LO95757 839 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 SBK3P0C264 359 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 VSIG10L2P0DP72 767 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TNNT1P13805 278 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 CHN1P15882 459 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TRIM21P19474 475 aaKnown RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 GCSHP23434 173 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 EEF1DP29692 281 aaKnown RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 PHKA1P46020 1223 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 CD97P48960 835 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 HDAC4P56524 1084 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 RTP1P59025 263 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 MFSD14BQ5SR56 506 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 CRTC1Q6UUV9 634 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 MFSD6Q6ZSS7 791 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 R3HCC1LQ7Z5L2 792 aaKnown RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 AMER3Q8N944 861 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 NOX5Q96PH1 765 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 TRIB1Q96RU8 372 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 SEPT5Q99719 369 aaPredicted RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 SLC25A23Q9BV35 468 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 GLIS2Q9BZE0 524 aaPredicted RBP3.23□□□□□ -1.89
UBXN4-208ENST00000490163 RASAL2Q9UJF2 1139 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 NUDT5Q9UKK9 219 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 GTF3C4Q9UKN8 822 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 ARID2Q68CP9 1835 aa3.23□□□□□ -1.89
UBXN4-208ENST00000490163 ZNF518AQ6AHZ1 1483 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 ROCK1Q13464 1354 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 MARCH11A6NNE9 402 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 DHX15O43143 795 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 CA12O43570 354 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 DAB1O75553 588 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 ITGB5P18084 799 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 GABRB1P18505 474 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 PNLIPRP2P54317 469 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 E2F5Q15329 346 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 CLUL1Q15846 466 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 INSCQ1MX18 579 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 ZIK1Q3SY52 487 aaPredicted RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 TMEM151AQ8N4L1 468 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 CHCHD4Q8N4Q1 142 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 DNAJC5GQ8N7S2 189 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 FLAD1Q8NFF5 587 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 TRPC4APQ8TEL6 797 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 ARHGEF2Q92974 986 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 MR1Q95460 341 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 DACH2Q96NX9 599 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 XYLT2Q9H1B5 865 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 RANBP17Q9H2T7 1088 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 NOP53Q9NZM5 478 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 IMPACTQ9P2X3 320 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 EIF2B4Q9UI10 523 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 PCDHA6Q9UN73 950 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 ASTN2O75129 1339 aaPredicted RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 KIAA1210Q9ULL0 1709 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 LOC102723996A0A087X1L8 192 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 HNRNPRO43390 633 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 TBC1D4O60343 1298 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 CER1O95813 267 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 MBPP02686 304 aaPredicted RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 AGAP20933 346 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 ITPKBP27987 946 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 GPC3P51654 580 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 SHC2P98077 582 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 EGR3Q06889 387 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 SMC1AQ14683 1233 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 C15orf59Q2T9L4 293 aaPredicted RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 XP32Q5T750 250 aa3.22□□□□□ -1.89
UBXN4-208ENST00000490163 DIS3L2Q8IYB7 885 aaKnown RBP3.22□□□□□ -1.89
UBXN4-208ENST00000490163 NETO1Q8TDF5 533 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms