RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, human

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-210	ENST00000489948	KPNA1	P52294	538 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	GNG11	P61952	73 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	PITX1	P78337	314 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	ATP11A	P98196	1134 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	RING1	Q06587	406 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	SCAP	Q12770	1279 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	MTA1	Q13330	715 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	PPP2R5D	Q14738	602 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	BRMS1L	Q5PSV4	323 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	PEX26	Q7Z412	305 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	PSTK	Q8IV42	348 aa	Known RBP	13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	TEKT4	Q8WW24	435 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	NTAN1	Q96AB6	310 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	MSLNL	Q96KJ4	702 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	C16orf45	Q96MC5	204 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	GOLPH3	Q9H4A6	298 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	IGFLR1	Q9H665	355 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	CCSER2	Q9H7U1	834 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	WDR6	Q9NNW5	1121 aa	Known RBP	13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	PIGV	Q9NUD9	493 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	DDIT4	Q9NX09	232 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	CALCOCO1	Q9P1Z2	691 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	DNMT3L	Q9UJW3	386 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	AMFR	Q9UKV5	643 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	TLR6	Q9Y2C9	796 aa		13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948	HBS1L	Q9Y450	684 aa	Known RBP	13.92	□□□□□ -0.18
TRAIP-210	ENST00000489948		A0A1W2PRU2	124 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	TMEM110-MUSTN1	A8MSY1	372 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	COCH	O43405	550 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	FTCD	O95954	541 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	KRT7	P08729	469 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	MYL4	P12829	197 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	WEE1	P30291	646 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	MIP	P30301	263 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	ATP5C1	P36542	298 aa	Known RBP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	CXCR3	P49682	368 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	SLC7A9	P82251	487 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	DEUP1	Q05D60	604 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	TRIP4	Q15650	581 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	HADH	Q16836	314 aa	Known RBP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	CDO1	Q16878	200 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	SLC5A9	Q2M3M2	681 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	ARHGAP15	Q53QZ3	475 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	C10orf120	Q5SQS8	335 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	RARS2	Q5T160	578 aa	Known RBP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	TMC5	Q6UXY8	1006 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	RHOT1	Q8IXI2	618 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	SLC39A13	Q96H72	371 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	WDR24	Q96S15	920 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	ADAM7	Q9H2U9	754 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	PIDD1	Q9HB75	910 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	MARCH2	Q9P0N8	246 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	USP18	Q9UMW8	372 aa		13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-210	ENST00000489948	C5orf42	Q9H799	3197 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	TRAV19	A0A0A6YYK7	116 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	C2orf78	A6NCI8	922 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	FANCG	O15287	622 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	PRPSAP2	O60256	369 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	SLC2A3	P11169	496 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	IGFBP4	P22692	258 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	CCR1	P32246	355 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	LTBR	P36941	435 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	TAS2R40	P59535	323 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	CYP4F8	P98187	520 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	EFEMP1	Q12805	493 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	SH3PXD2A	Q5TCZ1	1133 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	VSIG1	Q86XK7	387 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	CPNE8	Q86YQ8	564 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	KATNAL2	Q8IYT4	538 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	C12orf76	Q8N812	135 aa	Predicted RBP	13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	SMRP1	Q8NCR6	262 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	PLD4	Q96BZ4	506 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	ZFR	Q96KR1	1074 aa	Known RBP	13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	GUCD1	Q96NT3	240 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	PEBP4	Q96S96	227 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	CDX2	Q99626	313 aa	Predicted RBP	13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	NAPG	Q99747	312 aa	Predicted RBP	13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	TLR10	Q9BXR5	811 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	S1PR5	Q9H228	398 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	ATXN3L	Q9H3M9	355 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	TASP1	Q9H6P5	420 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	ARHGEF38	Q9NXL2	777 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	CLDND1	Q9NY35	253 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	RASAL2	Q9UJF2	1139 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	PCDHA3	Q9Y5H8	950 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	DOCK8	Q8NF50	2099 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	PRUNE2	Q8WUY3	3088 aa		13.9	□□□□□ -0.18
TRAIP-210	ENST00000489948	CTAGE9	A4FU28	777 aa		13.89	□□□□□ -0.19
TRAIP-210	ENST00000489948	NRG2	O14511	850 aa	Predicted RBP	13.89	□□□□□ -0.19
TRAIP-210	ENST00000489948	DDX3Y	O15523	660 aa	Known RBP	13.89	□□□□□ -0.19
TRAIP-210	ENST00000489948	MSI1	O43347	362 aa	Known RBP	13.89	□□□□□ -0.19
TRAIP-210	ENST00000489948	LATS1	O95835	1130 aa		13.89	□□□□□ -0.19
TRAIP-210	ENST00000489948	TBX18	O95935	607 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms