RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 NSUN2Q08J23 767 aaKnown RBP eCLIP6.08□□□□□ -1.44
CCDC39-206ENST00000489868 UBE4AQ14139 1066 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 YTHDF3Q7Z739 585 aaKnown RBP6.08□□□□□ -1.44
CCDC39-206ENST00000489868 MORC1Q86VD1 984 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 GRAMD1AQ96CP6 724 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 HS6ST2Q96MM7 605 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 KLHL13Q9P2N7 655 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 CEP83Q9Y592 693 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-206ENST00000489868 SMIM35A0A1B0GVV1 85 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 VIPP01282 170 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 PRR35P0CG20 571 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 ALADP13716 330 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 SSBP2P81877 361 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-206ENST00000489868 CCDC15Q0P6D6 951 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 CERKLQ49MI3 558 aaPredicted RBP6.07□□□□□ -1.44
CCDC39-206ENST00000489868 KIAA1614Q5VZ46 1190 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 RANBP10Q6VN20 620 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 NEK8Q86SG6 692 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 CLASRPQ8N2M8 674 aaKnown RBP6.07□□□□□ -1.44
CCDC39-206ENST00000489868 GALNT16Q8N428 558 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 FAM71DQ8N9W8 422 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 TTLL2Q9BWV7 592 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 VPS4AQ9UN37 437 aa6.07□□□□□ -1.44
CCDC39-206ENST00000489868 WDR17Q8IZU2 1322 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 TMEM232C9JQI7 657 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 J3KTA2 159 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 HNRNPDLO14979 420 aaKnown RBP6.06□□□□□ -1.44
CCDC39-206ENST00000489868 TAF5LO75529 589 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 SRGAP2BP0DMP2 458 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 CERS1P27544 350 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 ARHGAP25P42331 645 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 GAB1Q13480 694 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 BFSP2Q13515 415 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 ZKSCAN2Q63HK3 967 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 ZNF626Q68DY1 528 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 SLC18B1Q6NT16 456 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 MSANTD2Q6P1R3 559 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 ZNF813Q6ZN06 617 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 TOGARAM2Q6ZUX3 1019 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 NGDNQ8NEJ9 315 aaKnown RBP6.06□□□□□ -1.44
CCDC39-206ENST00000489868 IGFBPL1Q8WX77 278 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 SEMA4CQ9C0C4 833 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 EPS8L2Q9H6S3 715 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 TM7SF3Q9NS93 570 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 SLC52A1Q9NWF4 448 aa6.06□□□□□ -1.44
CCDC39-206ENST00000489868 SCAF8Q9UPN6 1271 aaKnown RBP6.06□□□□□ -1.44
CCDC39-206ENST00000489868 CCDC187A0A096LP49 1063 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 AQP12BA6NM10 295 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 PIP5K1BO14986 540 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 HTR3AP46098 478 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 DGKQP52824 942 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 WDR5P61964 334 aaKnown RBP6.05□□□□□ -1.44
CCDC39-206ENST00000489868 GRM4Q14833 912 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 DAZAP2Q15038 168 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-206ENST00000489868 CCDC144NLQ6NUI1 221 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 TLDC1Q6P9B6 456 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 SLC2A7Q6PXP3 512 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 RASGRP3Q8IV61 690 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 SYTL1Q8IYJ3 562 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 MUL1Q969V5 352 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 MCRS1Q96EZ8 462 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 NUDT22Q9BRQ3 303 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 CINPQ9BW66 212 aaPredicted RBP6.05□□□□□ -1.44
CCDC39-206ENST00000489868 PCGF6Q9BYE7 350 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 ABHD10Q9NUJ1 306 aa6.05□□□□□ -1.44
CCDC39-206ENST00000489868 WDR91A4D1P6 747 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 FCHO1O14526 889 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 RRHO14718 337 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 CTIFO43310 598 aaKnown RBP6.04□□□□□ -1.44
CCDC39-206ENST00000489868 KELP23276 732 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 JAK3P52333 1124 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 SEMA3BQ13214 749 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 KPNB1Q14974 876 aaKnown RBP6.04□□□□□ -1.44
CCDC39-206ENST00000489868 EZH2Q15910 746 aaKnown RBP6.04□□□□□ -1.44
CCDC39-206ENST00000489868 MTX3Q5HYI7 312 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 MEX3CQ5U5Q3 659 aaKnown RBP6.04□□□□□ -1.44
CCDC39-206ENST00000489868 C16orf89Q6UX73 402 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 TFAP2DQ7Z6R9 452 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.04□□□□□ -1.44
CCDC39-206ENST00000489868 MAP4K1Q92918 833 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 TMEM41AQ96HV5 264 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 WDR12Q9GZL7 423 aaKnown RBP6.04□□□□□ -1.44
CCDC39-206ENST00000489868 MLXIPLQ9NP71 852 aa6.04□□□□□ -1.44
CCDC39-206ENST00000489868 A0A087WV62 115 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 PRYO14603 147 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 BCAR3O75815 825 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 NTSR2O95665 410 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 ITGA5P08648 1049 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 ATP5F1P24539 256 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-206ENST00000489868 KLRK1P26718 216 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 YPEL5P62699 121 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 BTKQ06187 659 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 ZNF268Q14587 947 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-206ENST00000489868 SRSF7Q16629 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
CCDC39-206ENST00000489868 C4orf46Q504U0 113 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 VSTM1Q6UX27 236 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 OR1N1Q8NGS0 311 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 HIC2Q96JB3 615 aa6.03□□□□□ -1.44
CCDC39-206ENST00000489868 ADGRE3Q9BY15 652 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms