RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 SALL4Q9UJQ4 1053 aa14.48□□□□□ -0.09
C9orf3-221ENST00000489562 HBS1LQ9Y450 684 aaKnown RBP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 ZFP37Q9Y6Q3 630 aaPredicted RBP14.48□□□□□ -0.09
C9orf3-221ENST00000489562 A0A0U1RQJ8 604 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 M0QYT0 321 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 IRAK2O43187 625 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 BUB1O43683 1085 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 BUB1BO60566 1050 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-221ENST00000489562 CKMP06732 381 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 SLC2A3P11169 496 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 MBL2P11226 248 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-221ENST00000489562 GJA1P17302 382 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 CEBPBP17676 345 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 KCNA5P22460 613 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 MSNP26038 577 aaKnown RBP14.47□□□□□ -0.09
C9orf3-221ENST00000489562 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
C9orf3-221ENST00000489562 PCK1P35558 622 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 AVPR1AP37288 418 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 ATP11AP98196 1134 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 DEUP1Q05D60 604 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 RING1Q06587 406 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 ZNF252P-AS1Q0IIN9 211 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 MTA1Q13330 715 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 MESDQ14696 234 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 CBX2Q14781 532 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-221ENST00000489562 DDX42Q86XP3 938 aaKnown RBP eCLIP14.47□□□□□ -0.09
C9orf3-221ENST00000489562 CMTM8Q8IZV2 173 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 MAB21L3Q8N8X9 362 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 TRIM58Q8NG06 486 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 ITFG1Q8TB96 612 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 FAM172AQ8WUF8 416 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 ATRIPQ8WXE1 791 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 SUSD6Q92537 303 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 TBCBQ99426 244 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 TRIM7Q9C029 511 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 DDIT4Q9NX09 232 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 RASAL2Q9UJF2 1139 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 TLR6Q9Y2C9 796 aa14.47□□□□□ -0.09
C9orf3-221ENST00000489562 USP15Q9Y4E8 981 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-221ENST00000489562 H3BQ06 376 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 MOCS3O95396 460 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 TRIP4Q15650 581 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 CDO1Q16878 200 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 C15orf59Q2T9L4 293 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 PUS10Q3MIT2 529 aaKnown RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 BRMS1LQ5PSV4 323 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 OTUD1Q5VV17 481 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 GET4Q7L5D6 327 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 DAAM2Q86T65 1068 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 MIB1Q86YT6 1006 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 NPAS3Q8IXF0 933 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 ARL14EPQ8N8R7 260 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 MAFAQ8NHW3 353 aaPredicted RBP14.46□□□□□ -0.09
C9orf3-221ENST00000489562 PPM1EQ8WY54 764 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 ING5Q8WYH8 240 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 PLD4Q96BZ4 506 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 BTBD6Q96KE9 485 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 SLC46A2Q9BY10 475 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 RNF38Q9H0F5 515 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 SFMBT1Q9UHJ3 866 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 NUDT5Q9UKK9 219 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 CDH7Q9ULB5 785 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 ARHGAP26Q9UNA1 814 aa14.46□□□□□ -0.09
C9orf3-221ENST00000489562 SLC12A8A0AV02 714 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 GRID2IPA4D2P6 1211 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 USP27XA6NNY8 438 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 KIF5CO60282 957 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 LRCH4O75427 683 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 TBX18O95935 607 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 IGLV3-27P01718 113 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 APOEP02649 317 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 TCF3P15923 654 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 CCR1P32246 355 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 CXCR3P49682 368 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 AIF1P55008 147 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 TBX4P57082 545 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 PITX1P78337 314 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-221ENST00000489562 NME3Q13232 169 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 EIF4EBP2Q13542 120 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-221ENST00000489562 PPP2R5DQ14738 602 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 CLUL1Q15846 466 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 HADHQ16836 314 aaKnown RBP14.45□□□□□ -0.1
C9orf3-221ENST00000489562 LEXMQ3ZCV2 418 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 STXBP5Q5T5C0 1151 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 NUGGCQ68CJ6 796 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 SLFN11Q7Z7L1 901 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 ZSCAN30Q86W11 494 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 UNC45BQ8IWX7 931 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 LRRC57Q8N9N7 239 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 ADAM32Q8TC27 787 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 FGF13Q92913 245 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 KLF16Q9BXK1 252 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-221ENST00000489562 KIF9Q9HAQ2 790 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 PIGVQ9NUD9 493 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.45□□□□□ -0.1
C9orf3-221ENST00000489562 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.45□□□□□ -0.1
C9orf3-221ENST00000489562 FAM50BQ9Y247 325 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 ALG6Q9Y672 507 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 CAPN6Q9Y6Q1 641 aa14.45□□□□□ -0.1
C9orf3-221ENST00000489562 TMEM110-MUSTN1A8MSY1 372 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms