RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PREPLQ4J6C6 727 aaPredicted RBP18.12■□□□□ 0.49
MDC1-206ENST00000489540 CACNA2D4Q7Z3S7 1137 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 NOP9Q86U38 636 aaKnown RBP18.12■□□□□ 0.49
MDC1-206ENST00000489540 TMEM25Q86YD3 366 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 SPEM1Q8N4L4 309 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 IPO4Q8TEX9 1081 aaKnown RBP18.12■□□□□ 0.49
MDC1-206ENST00000489540 SYNCQ9H7C4 482 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 POPDC2Q9HBU9 364 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 ASNSD1Q9NWL6 643 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 FBXO4Q9UKT5 387 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 TICRRQ7Z2Z1 1910 aa18.12■□□□□ 0.49
MDC1-206ENST00000489540 A0A1W2PQC6 194 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 FYNP06241 537 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 CCR3P51677 355 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 PPP2R5DQ14738 602 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 ANO4Q32M45 955 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 EFHC1Q5JVL4 640 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 TAF3Q5VWG9 929 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 NAIF1Q69YI7 327 aaPredicted RBP18.11■□□□□ 0.49
MDC1-206ENST00000489540 ZDHHC17Q8IUH5 632 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 EPS8L1Q8TE68 723 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 ATOH1Q92858 354 aaPredicted RBP18.11■□□□□ 0.49
MDC1-206ENST00000489540 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
MDC1-206ENST00000489540 PNKPQ96T60 521 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 MARK1Q9P0L2 795 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 AGO1Q9UL18 857 aaKnown RBP18.11■□□□□ 0.49
MDC1-206ENST00000489540 NAALADL1Q9UQQ1 740 aa18.11■□□□□ 0.49
MDC1-206ENST00000489540 ATG13O75143 517 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 EGFP01133 1207 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 CCDC172P0C7W6 258 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 CXCL12P48061 93 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 CDR2Q01850 454 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 NHLH1Q02575 133 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 RING1Q06587 406 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 NR1I3Q14994 352 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 PTPN20Q4JDL3 420 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 TPGS1Q6ZTW0 290 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 DENND1CQ8IV53 801 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 SERPINB11Q96P15 392 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 NOCTQ9UK39 431 aaKnown RBP18.1■□□□□ 0.49
MDC1-206ENST00000489540 KIF26AQ9ULI4 1882 aaPredicted RBP18.1■□□□□ 0.49
MDC1-206ENST00000489540 MYO6Q9UM54 1294 aa18.1■□□□□ 0.49
MDC1-206ENST00000489540 KMT2EQ8IZD2 1858 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 A0A0A0MRY4 1105 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 LATS1O95835 1130 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 ERBB2P04626 1255 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 MMEP08473 750 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 SLC6A11P48066 632 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 FANCCQ00597 558 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 CSTF1Q05048 431 aaKnown RBP18.09■□□□□ 0.49
MDC1-206ENST00000489540 NNTQ13423 1086 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 GAS6Q14393 721 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 ZNF528Q3MIS6 628 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 OR6B2Q6IFH4 312 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 Q6ZS52 159 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 TOGARAM2Q6ZUX3 1019 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 NUDT18Q6ZVK8 323 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 ERICH1Q86X53 443 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 ETFBKMTQ8IXQ9 262 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 MAML2Q8IZL2 1156 aaPredicted RBP18.09■□□□□ 0.49
MDC1-206ENST00000489540 MSANTD4Q8NCY6 345 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 DQX1Q8TE96 717 aaKnown RBP18.09■□□□□ 0.49
MDC1-206ENST00000489540 C18orf8Q96DM3 657 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 FAM122AQ96E09 287 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 XPO6Q96QU8 1125 aaKnown RBP18.09■□□□□ 0.49
MDC1-206ENST00000489540 BBS2Q9BXC9 721 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 DEC1Q9P2X7 70 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 TJP2Q9UDY2 1190 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 MUC6Q6W4X9 2439 aa18.09■□□□□ 0.49
MDC1-206ENST00000489540 NEDD8-MDP1E9PL57 170 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 MSI1O43347 362 aaKnown RBP18.08■□□□□ 0.49
MDC1-206ENST00000489540 HSF2BPO75031 334 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 APODP05090 189 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 SP9P0CG40 484 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 GRIA2P42262 883 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 GABRB2P47870 512 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 TBX4P57082 545 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 SLC6A3Q01959 620 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 SYPL2Q5VXT5 272 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 NUGGCQ68CJ6 796 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 TRIM72Q6ZMU5 477 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 CPXM2Q8N436 756 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 NAT16Q8N8M0 369 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 AZIN2Q96A70 460 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 PRMT8Q9NR22 394 aaPredicted RBP18.08■□□□□ 0.49
MDC1-206ENST00000489540 ARHGEF4Q9NR80 690 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 STOML2Q9UJZ1 356 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 TLR6Q9Y2C9 796 aa18.08■□□□□ 0.49
MDC1-206ENST00000489540 CHURC1-FNTBB4DL54 471 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 CACNG3O60359 315 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 RNF40O75150 1001 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 TULP3O75386 442 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 KAT7O95251 611 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 IGLV3-27P01718 113 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 CYBBP04839 570 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 TYRP14679 529 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 FERP16591 822 aa18.07■□□□□ 0.48
MDC1-206ENST00000489540 TNFRSF4P43489 277 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms