RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SLC9A5Q14940 896 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 WASHC2DQ5SRD0 308 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 ERMARDQ5T6L9 678 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 MFSD7Q6UXD7 560 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 TMPRSS6Q8IU80 811 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 EDEM1Q92611 657 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 APOPT1Q96IL0 206 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 ZFP42Q96MM3 310 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 ACOX2Q99424 681 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 PCDHA3Q9Y5H8 950 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 GLP2RO95838 553 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 RBP1P09455 135 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 TKTL1P51854 596 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 ZNF606Q8WXB4 792 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 CHST7Q9NS84 486 aa18.09■□□□□ 0.49
NPHP4-209ENST00000489180 FAM86B1E9PN63 330 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 FAM86B2P0C5J1 330 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 DPEP1P16444 411 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 OXCT1P55809 520 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 LAMTOR4Q0VGL1 99 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 ZSCAN18Q8TBC5 510 aaPredicted RBP18.08■□□□□ 0.49
NPHP4-209ENST00000489180 ZNF75CPQ92670 426 aaPredicted RBP18.08■□□□□ 0.49
NPHP4-209ENST00000489180 NAT9Q9BTE0 207 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 AGXT2Q9BYV1 514 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 PAPOLBQ9NRJ5 636 aaKnown RBP18.08■□□□□ 0.49
NPHP4-209ENST00000489180 DDX18Q9NVP1 670 aaKnown RBP18.08■□□□□ 0.49
NPHP4-209ENST00000489180 MPP6Q9NZW5 540 aa18.08■□□□□ 0.49
NPHP4-209ENST00000489180 CALCAP01258 141 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
NPHP4-209ENST00000489180 VAC14Q08AM6 782 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 FAAP100Q0VG06 881 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 C4orf19Q8IY42 314 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 FIG4Q92562 907 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 ZNF446Q9NWS9 450 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 SHOC2Q9UQ13 582 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 PRR23AA6NEV1 266 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 GOLGA8TH3BQL2 631 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 SOX6P35712 828 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 KCTD19Q17RG1 926 aaPredicted RBP18.08■□□□□ 0.48
NPHP4-209ENST00000489180 LPCAT2Q7L5N7 544 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 LUZP2Q86TE4 346 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 GMCL1P1Q8NEA9 526 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 KATNA1O75449 491 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 DDHD2O94830 711 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 ALDH5A1P51649 535 aaPredicted RBP18.08■□□□□ 0.48
NPHP4-209ENST00000489180 IL5RAQ01344 420 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 TP53BP2Q13625 1128 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 ZNF484Q5JVG2 852 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 OTUD3Q5T2D3 398 aaPredicted RBP18.08■□□□□ 0.48
NPHP4-209ENST00000489180 DNAJC18Q9H819 358 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 TSPAN16Q9UKR8 245 aa18.08■□□□□ 0.48
NPHP4-209ENST00000489180 TIMM13Q9Y5L4 95 aaPredicted RBP18.08■□□□□ 0.48
NPHP4-209ENST00000489180 COPG1Q9Y678 874 aaKnown RBP18.08■□□□□ 0.48
NPHP4-209ENST00000489180 SLCO1B7G3V0H7 640 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 TBC1D12O60347 775 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 F9P00740 461 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 PCNAP12004 261 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 ITGB6P18564 788 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 ARL4DP49703 201 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CYP2R1Q6VVX0 501 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 INTS13Q9NVM9 706 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 TOMM70O94826 608 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 ZSCAN5DPP0CG00 497 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 ATP1A4Q13733 1029 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 SLC35C1Q96A29 364 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 DRG1Q9Y295 367 aaKnown RBP18.07■□□□□ 0.48
NPHP4-209ENST00000489180 SLITRK3O94933 977 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 MPOP05164 745 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 PAX7P23759 505 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 MAPK10P53779 464 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 RPS7P62081 194 aaKnown RBP18.07■□□□□ 0.48
NPHP4-209ENST00000489180 BST2Q10589 180 aaKnown RBP18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CNTN1Q12860 1018 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 OR8H2Q8N162 312 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 GMCL1Q96IK5 515 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CLPBQ9H078 707 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 SERPINE1P05121 402 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 ZNF286BP0CG31 522 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 ADRA1DP25100 572 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 RRM2P31350 389 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 RGS2P41220 211 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 NDST1P52848 882 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CBWD6Q4V339 395 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 TMEM119Q4V9L6 283 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CBWD3Q5JTY5 395 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CBWD5Q5RIA9 395 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 STYK1Q6J9G0 422 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 LRRC74BQ6ZQY2 392 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 ATG16L2Q8NAA4 619 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 DCUN1D5Q9BTE7 237 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 SEMA6AQ9H2E6 1030 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 PDGFCQ9NRA1 345 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CAMSAP1Q5T5Y3 1602 aa18.07■□□□□ 0.48
NPHP4-209ENST00000489180 CNTNAP4Q9C0A0 1308 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 SHBGP04278 402 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 AMPD1P23109 780 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 CAPZA2P47755 286 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 POLD3Q15054 466 aaPredicted RBP18.06■□□□□ 0.48
NPHP4-209ENST00000489180 TISP43B9A030 160 aa18.06■□□□□ 0.48
NPHP4-209ENST00000489180 MICAL2O94851 1124 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms