RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MDM4O15151 490 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 HLA-EP13747 358 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 AFF3P51826 1226 aaKnown RBP17.06■□□□□ 0.32
USP48-210ENST00000489108 COPAP53621 1224 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 TRPC3Q13507 836 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 SNRNP35Q16560 246 aaKnown RBP17.06■□□□□ 0.32
USP48-210ENST00000489108 Q6ZNB5 142 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 ZNF605Q86T29 641 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 CGRRF1Q99675 332 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 FBXO44Q9H4M3 255 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 C6orf106Q9H6K1 298 aaPredicted RBP17.06■□□□□ 0.32
USP48-210ENST00000489108 CYLDQ9NQC7 956 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 KRT82Q9NSB4 513 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
USP48-210ENST00000489108 NPC1O15118 1278 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 STAU1O95793 577 aaKnown RBP17.05■□□□□ 0.32
USP48-210ENST00000489108 EIF2S3P41091 472 aaKnown RBP17.05■□□□□ 0.32
USP48-210ENST00000489108 GRK6P43250 576 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 PLA2G4AP47712 749 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 MFAP3P55082 362 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 MAP3K7CLP57077 242 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 ZNF234Q14588 700 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 PSMD6Q15008 389 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 LARP1BQ659C4 914 aaKnown RBP17.05■□□□□ 0.32
USP48-210ENST00000489108 ACOT1Q86TX2 421 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 TMPRSS12Q86WS5 348 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 UCMAQ8WVF2 138 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 ELMO3Q96BJ8 720 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 TNIP3Q96KP6 325 aa17.05■□□□□ 0.32
USP48-210ENST00000489108 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
USP48-210ENST00000489108 CKAP5Q14008 2032 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 CYSRT1A8MQ03 144 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 H0Y8X5 98 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 CLIC2O15247 247 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 TLX3O43711 291 aaPredicted RBP17.04■□□□□ 0.32
USP48-210ENST00000489108 PCDHGA12O60330 932 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 CCDC130P13994 396 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 PRKCHP24723 683 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 ATICP31939 592 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 ACSL1P33121 698 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 CLDN6P56747 220 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 TEAD4Q15561 434 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 KCNT1Q5JUK3 1230 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 FYB2Q5VWT5 728 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 LAYNQ6UX15 382 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 LRRC69Q6ZNQ3 347 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 CCDC65Q8IXS2 484 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 ZNF843Q8N446 348 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 SYAP1Q96A49 352 aaPredicted RBP17.04■□□□□ 0.32
USP48-210ENST00000489108 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 GZF1Q9H116 711 aaPredicted RBP17.04■□□□□ 0.32
USP48-210ENST00000489108 SDCBP2Q9H190 292 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 PCED1AQ9H1Q7 454 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 NMUR1Q9HB89 426 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 CSNK1G1Q9HCP0 422 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 TM9SF3Q9HD45 589 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 ELOVL2Q9NXB9 296 aa17.04■□□□□ 0.32
USP48-210ENST00000489108 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
USP48-210ENST00000489108 CYP26A1O43174 497 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 TGFB1I1O43294 461 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 PHACTR2O75167 634 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 STC2O76061 302 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 PENKP01210 267 aaPredicted RBP17.03■□□□□ 0.32
USP48-210ENST00000489108 KLKB1P03952 638 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 EPHX1P07099 455 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 RARGP13631 454 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 JUPP14923 745 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 TXLNAP40222 546 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 CCT8P50990 548 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 IL9RQ01113 521 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 SEMG2Q02383 582 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 ORC1Q13415 861 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 CCDC73Q6ZRK6 1079 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 STXBP4Q6ZWJ1 553 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 GPRIN1Q7Z2K8 1008 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 SLC2A14Q8TDB8 520 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 SORCS1Q8WY21 1168 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 IGSF8Q969P0 613 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 PIWIL1Q96J94 861 aaKnown RBP17.03■□□□□ 0.32
USP48-210ENST00000489108 DNMT3LQ9UJW3 386 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 CLEC4EQ9ULY5 219 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 SCML2Q9UQR0 700 aa17.03■□□□□ 0.32
USP48-210ENST00000489108 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.03■□□□□ 0.32
USP48-210ENST00000489108 MUC22E2RYF6 1773 aaPredicted RBP17.02■□□□□ 0.32
USP48-210ENST00000489108 PTPRQQ9UMZ3 2332 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 A0A087X0B3 334 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 A0A1W2PQH9 124 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 STAT6P42226 847 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 GRIA4P48058 902 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 CYP2J2P51589 502 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 C10orf120Q5SQS8 335 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 KLHDC10Q6PID8 442 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 SCARA5Q6ZMJ2 495 aa17.02■□□□□ 0.32
USP48-210ENST00000489108 RBBP8NLQ8NC74 664 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms