RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 SERPINB11Q96P15 392 aa12.85□□□□□ -0.35
TRAIP-209ENST00000488860 SLC22A12Q96S37 553 aa12.85□□□□□ -0.35
TRAIP-209ENST00000488860 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
TRAIP-209ENST00000488860 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
TRAIP-209ENST00000488860 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
TRAIP-209ENST00000488860 RRN3Q9NYV6 651 aa12.85□□□□□ -0.35
TRAIP-209ENST00000488860 MARCH2Q9P0N8 246 aa12.85□□□□□ -0.35
TRAIP-209ENST00000488860 IP6K2Q9UHH9 426 aa12.85□□□□□ -0.35
TRAIP-209ENST00000488860 DNMT3LQ9UJW3 386 aa12.85□□□□□ -0.35
TRAIP-209ENST00000488860 IRAK2O43187 625 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 MBTPS2O43462 519 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 MTA2O94776 668 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 TRUB2O95900 331 aaKnown RBP12.84□□□□□ -0.35
TRAIP-209ENST00000488860 GBP1P32455 592 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 RDXP35241 583 aaKnown RBP12.84□□□□□ -0.35
TRAIP-209ENST00000488860 GJC1P36383 396 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 ARHGAP25P42331 645 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 PTPN9P43378 593 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
TRAIP-209ENST00000488860 IFI16Q16666 785 aaKnown RBP12.84□□□□□ -0.35
TRAIP-209ENST00000488860 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 HS1BP3Q53T59 392 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 OTUD1Q5VV17 481 aaPredicted RBP12.84□□□□□ -0.35
TRAIP-209ENST00000488860 DAB2IPQ5VWQ8 1189 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 ARCQ7LC44 396 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
TRAIP-209ENST00000488860 FNIP1Q8TF40 1166 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 FGF13Q92913 245 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 RNF34Q969K3 372 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 CYP2S1Q96SQ9 504 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 NPY6RQ99463 290 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 CNPY3Q9BT09 278 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 SLC46A2Q9BY10 475 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 ADAM33Q9BZ11 813 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 RNF38Q9H0F5 515 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 GOLPH3Q9H4A6 298 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 CPQQ9Y646 472 aa12.84□□□□□ -0.35
TRAIP-209ENST00000488860 KIF26AQ9ULI4 1882 aaPredicted RBP12.84□□□□□ -0.35
TRAIP-209ENST00000488860 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
TRAIP-209ENST00000488860 RNF8O76064 485 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 OLFM2O95897 454 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 TBX4P57082 545 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 PIGHQ14442 188 aaPredicted RBP12.83□□□□□ -0.36
TRAIP-209ENST00000488860 TCEAL1Q15170 157 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 SCYL2Q6P3W7 929 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 KLHDC10Q6PID8 442 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 SND1Q7KZF4 910 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAIP-209ENST00000488860 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 CPNE8Q86YQ8 564 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 REXO1L1PQ8IX06 675 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 CMTM8Q8IZV2 173 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 TPCN2Q8NHX9 752 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.83□□□□□ -0.36
TRAIP-209ENST00000488860 ZSCAN18Q8TBC5 510 aaPredicted RBP12.83□□□□□ -0.36
TRAIP-209ENST00000488860 SUSD6Q92537 303 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 MYADMQ96S97 322 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 PIGVQ9NUD9 493 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAIP-209ENST00000488860 CALCOCO1Q9P1Z2 691 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 LCMT1Q9UIC8 334 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 CDH7Q9ULB5 785 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 HYOU1Q9Y4L1 999 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 CAPN6Q9Y6Q1 641 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.36
TRAIP-209ENST00000488860 PRUNE2Q8WUY3 3088 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 GRID2IPA4D2P6 1211 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 GOLGA6L9A6NEM1 432 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 SCAMP3O14828 347 aaKnown RBP12.82□□□□□ -0.36
TRAIP-209ENST00000488860 SPOPO43791 374 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 PALMO75781 387 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 PROSCO94903 275 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 MOCS2O96007 188 aaPredicted RBP12.82□□□□□ -0.36
TRAIP-209ENST00000488860 IGLV3-25P01717 112 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 APOEP02649 317 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 TNNT1P13805 278 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 PFKLP17858 780 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 HADHBP55084 474 aaKnown RBP12.82□□□□□ -0.36
TRAIP-209ENST00000488860 SLC7A9P82251 487 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 TFF2Q03403 129 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 TRIP4Q15650 581 aaPredicted RBP12.82□□□□□ -0.36
TRAIP-209ENST00000488860 LEXMQ3ZCV2 418 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 PTCRAQ6ISU1 281 aaPredicted RBP12.82□□□□□ -0.36
TRAIP-209ENST00000488860 C11orf63Q6NUN7 778 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 ZNF662Q6ZS27 426 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 STRADAQ7RTN6 431 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 ZNF276Q8N554 614 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 ST13P5Q8NFI4 369 aaPredicted RBP12.82□□□□□ -0.36
TRAIP-209ENST00000488860 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 ALS2CR12Q96Q35 445 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 ZMYM5Q9UJ78 669 aa12.82□□□□□ -0.36
TRAIP-209ENST00000488860 CCL26Q9Y258 94 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms