RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TULP3O75386 442 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 KAT7O95251 611 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 LTFP02788 710 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 PDCLQ13371 301 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 RAPGEF1Q13905 1077 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 KLHL40Q2TBA0 621 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 ANO4Q32M45 955 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 TPGS1Q6ZTW0 290 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 DENND1CQ8IV53 801 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 FAM217AQ8IXS0 508 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 USP33Q8TEY7 942 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 RNF139Q8WU17 664 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 NKD2Q969F2 451 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 BPIFA3Q9BQP9 254 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 DCLK3Q9C098 648 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 ZNF510Q9Y2H8 683 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 HBS1LQ9Y450 684 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 ZFHX2Q9C0A1 2572 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 GPR179Q6PRD1 2367 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 LGALS16A8MUM7 142 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 GFRA2O00451 464 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 MSI1O43347 362 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 CACNG3O60359 315 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 TYRP14679 529 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 GRIA2P42262 883 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 KIR2DL1P43626 348 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 BPIFB4P59827 614 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 PPP2R5DQ14738 602 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 EMC10Q5UCC4 262 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 ZC3H14Q6PJT7 736 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 BEND5Q7L4P6 421 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 DHX40Q8IX18 779 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 AOPEPQ8N6M6 819 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 RPLP0P6Q8NHW5 317 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 ATRIPQ8WXE1 791 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 DDX1Q92499 740 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 PLD4Q96BZ4 506 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 CPXM1Q96SM3 734 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 ARHGEF4Q9NR80 690 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 WDR35Q9P2L0 1181 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 STOML2Q9UJZ1 356 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 FBXO10Q9UK96 956 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 HCN2Q9UL51 889 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
CTDSP1-209ENST00000488627 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 NEDD8-MDP1E9PL57 170 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 F8VZ95 297 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 GFRA3O60609 400 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 PENKP01210 267 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 IGLV3-27P01718 113 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 CISD3P0C7P0 127 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 ATP1A3P13637 1013 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 CYP11B1P15538 503 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 TNFRSF4P43489 277 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 NRLP54845 237 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 FKBP15Q5T1M5 1219 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 FYB2Q5VWT5 728 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 SYPL2Q5VXT5 272 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 SYT13Q7L8C5 426 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 PASD1Q8IV76 773 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 SUMF1Q8NBK3 374 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 DEC1Q9P2X7 70 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 USP34Q70CQ2 3546 aa16.65■□□□□ 0.26
CTDSP1-209ENST00000488627 SART1O43290 800 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 LMNAP02545 664 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 APODP05090 189 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 TPM2P07951 284 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 NCAM1P13591 858 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 CDK11BP21127 795 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 CDH5P33151 784 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 KRT9P35527 623 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 CHKAP35790 457 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 FNTBP49356 437 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 JAM2P57087 298 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 MRPS21P82921 87 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 KDSRQ06136 332 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 SYCP1Q15431 976 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 TAF5Q15542 800 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 C2orf27AQ580R0 203 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 CPXM2Q8N436 756 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 C1orf131Q8NDD1 294 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 CCDC26Q8TAB7 109 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 DQX1Q8TE96 717 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 PPP1R13BQ96KQ4 1090 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 ERGIC2Q96RQ1 377 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 NAT10Q9H0A0 1025 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 FAM207AQ9NSI2 230 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 DNAJC17Q9NVM6 304 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 PLK2Q9NYY3 685 aa16.64■□□□□ 0.25
CTDSP1-209ENST00000488627 TBC1D3BA6NDS4 549 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 HRO43593 1189 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 ERBB2P04626 1255 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 HARS2P49590 506 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 SEC13P55735 322 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 POLR2FP61218 127 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 RING1Q06587 406 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 EIF4EBP2Q13542 120 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 DMC1Q14565 340 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms