RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 XPO6Q96QU8 1125 aaKnown RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 DCLK3Q9C098 648 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 PLK2Q9NYY3 685 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 WDR35Q9P2L0 1181 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 AGO1Q9UL18 857 aaKnown RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 ZNF510Q9Y2H8 683 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 SGK1O00141 431 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 MSI1O43347 362 aaKnown RBP18.56■□□□□ 0.56
ITGB1-215ENST00000488494 USP8P40818 1118 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 ARHGAP44Q17R89 818 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 DENND1BQ6P3S1 775 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 GPT2Q8TD30 523 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 IRGQQ8WZA9 623 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 P2RY11Q96G91 374 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 ACP6Q9NPH0 428 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 AJAP1Q9UKB5 411 aaPredicted RBP18.56■□□□□ 0.56
ITGB1-215ENST00000488494 USP18Q9UMW8 372 aa18.56■□□□□ 0.56
ITGB1-215ENST00000488494 EML5Q05BV3 1969 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 DCHS1Q96JQ0 3298 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 A0A0A0MRY4 1105 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 BECN2A8MW95 431 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 THAP12O43422 761 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 MED7O43513 233 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 LETM1O95202 739 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-215ENST00000488494 RETP07949 1114 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 PRKCSHP14314 528 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-215ENST00000488494 HNRNPLP14866 589 aaKnown RBP eCLIP18.55■□□□□ 0.561e-6■■□□□ 13.6
ITGB1-215ENST00000488494 PON1P27169 355 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 GNA15P30679 374 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 DGKEP52429 567 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 CRY1Q16526 586 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 HSF5Q4G112 596 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-215ENST00000488494 TMEM92Q6UXU6 159 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 TOGARAM2Q6ZUX3 1019 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 KBTBD6Q86V97 674 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 ZNF513Q8N8E2 541 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-215ENST00000488494 HSFY1Q96LI6 401 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 FAM81BQ96LP2 452 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 TPSD1Q9BZJ3 242 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 MIS12Q9H081 205 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 PARD6AQ9NPB6 346 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 SIX2Q9NPC8 291 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 ST7Q9NRC1 585 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 ABCC13Q9NSE7 274 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 EBF1Q9UH73 591 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 SFMBT1Q9UHJ3 866 aa18.55■□□□□ 0.56
ITGB1-215ENST00000488494 HBS1LQ9Y450 684 aaKnown RBP18.55■□□□□ 0.56
ITGB1-215ENST00000488494 ADAM23O75077 832 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 FBXO21O94952 628 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 PENKP01210 267 aaPredicted RBP18.54■□□□□ 0.56
ITGB1-215ENST00000488494 LTFP02788 710 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 CHKAP35790 457 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 GPD2P43304 727 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 DGKGP49619 791 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 SPEM2Q0P670 501 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 TRIP4Q15650 581 aaPredicted RBP18.54■□□□□ 0.56
ITGB1-215ENST00000488494 VWA3BQ502W6 1294 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 MIIPQ5JXC2 388 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 EOGTQ5NDL2 527 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 MSANTD2Q6P1R3 559 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 NUDT18Q6ZVK8 323 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 CACNA2D4Q7Z3S7 1137 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 MDGA1Q8NFP4 955 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 SHC3Q92529 594 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 GOLGA1Q92805 767 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 TUBGCP2Q9BSJ2 902 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 NDST4Q9H3R1 872 aa18.54■□□□□ 0.56
ITGB1-215ENST00000488494 KCNJ18B7U540 433 aa18.53■□□□□ 0.56
ITGB1-215ENST00000488494 PES1O00541 588 aaKnown RBP18.53■□□□□ 0.56
ITGB1-215ENST00000488494 HARS2P49590 506 aaKnown RBP18.53■□□□□ 0.56
ITGB1-215ENST00000488494 KCNJ12Q14500 433 aa18.53■□□□□ 0.56
ITGB1-215ENST00000488494 MEA1Q16626 185 aa18.53■□□□□ 0.56
ITGB1-215ENST00000488494 FYB2Q5VWT5 728 aa18.53■□□□□ 0.56
ITGB1-215ENST00000488494 EGFLAMQ63HQ2 1017 aa18.53■□□□□ 0.56
ITGB1-215ENST00000488494 TRMT11Q7Z4G4 463 aaKnown RBP18.53■□□□□ 0.56
ITGB1-215ENST00000488494 RASSF3Q86WH2 238 aa18.53■□□□□ 0.56
ITGB1-215ENST00000488494 GPR161Q8N6U8 529 aaKnown RBP18.53■□□□□ 0.56
ITGB1-215ENST00000488494 HCN2Q9UL51 889 aa18.53■□□□□ 0.56
ITGB1-215ENST00000488494 TCRBV21S2A2A0A5A6 115 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 PRRT4C9JH25 899 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 GOLGA6L22H0YM25 854 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 DCLK1O15075 740 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 ALDH1A2O94788 518 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 CYBBP04839 570 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 PNMA6AP0CW24 399 aaPredicted RBP18.52■□□□□ 0.56
ITGB1-215ENST00000488494 TGM1P22735 817 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 RBM43Q6ZSC3 357 aaKnown RBP18.52■□□□□ 0.56
ITGB1-215ENST00000488494 FAM217AQ8IXS0 508 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 CPXM2Q8N436 756 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 KCNV2Q8TDN2 545 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 HMGB4Q8WW32 186 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 ZNF606Q8WXB4 792 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 FAM149B1Q96BN6 582 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 RMDN1Q96DB5 314 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 POLMQ9NP87 494 aaPredicted RBP18.52■□□□□ 0.56
ITGB1-215ENST00000488494 SAMSN1Q9NSI8 373 aaKnown RBP18.52■□□□□ 0.56
ITGB1-215ENST00000488494 BCCIPQ9P287 314 aaKnown RBP eCLIP18.52■□□□□ 0.56
ITGB1-215ENST00000488494 CYTH4Q9UIA0 394 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 INVSQ9Y283 1065 aa18.52■□□□□ 0.56
ITGB1-215ENST00000488494 NFE2L3Q9Y4A8 694 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms