RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 ZSWIM1Q9BR11 485 aa11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 LSM14BQ9BX40 385 aaKnown RBP11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 FSCN3Q9NQT6 498 aa11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 CACNA2D2Q9NY47 1150 aa11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 CLIC5Q9NZA1 410 aa11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 CALCOCO1Q9P1Z2 691 aa11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 BCCIPQ9P287 314 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 LSM7Q9UK45 103 aaKnown RBP11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 MAN1B1Q9UKM7 699 aa11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 TSPAN16Q9UKR8 245 aa11.79□□□□□ -0.52
PCYT1A-215ENST00000488235 RNF225M0QZC1 329 aaPredicted RBP11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 SLC16A3O15427 465 aaKnown RBP11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 GADD45BO75293 160 aaPredicted RBP11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 NDUFV2P19404 249 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 NTSR1P30989 418 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 CORO1AP31146 461 aaKnown RBP11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 TKTL1P51854 596 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 FKBP3Q00688 224 aaKnown RBP11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 GEN1Q17RS7 908 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 CYP2U1Q7Z449 544 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 CHPFQ8IZ52 775 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 ZNF276Q8N554 614 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 ANKRD52Q8NB46 1076 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 UBA3Q8TBC4 463 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 TFAP2BQ92481 460 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 SMARCE1Q969G3 411 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 FAXDC2Q96IV6 333 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 GABRG3Q99928 467 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 ULBP1Q9BZM6 244 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 RMND1Q9NWS8 449 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 ARMCX3Q9UH62 379 aaPredicted RBP11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 FBXO10Q9UK96 956 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 AGO1Q9UL18 857 aaKnown RBP11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 CACNA1EQ15878 2313 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 IGF2RP11717 2491 aa11.78□□□□□ -0.52
PCYT1A-215ENST00000488235 TNRC6BQ9UPQ9 1833 aaKnown RBP11.77□□□□□ -0.52
PCYT1A-215ENST00000488235 O00370 1275 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 PIK3R2O00459 728 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 KCNK5O95279 499 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 ITPKAP23677 461 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 DGKGP49619 791 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 PSEN1P49768 467 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 YWHAGP61981 247 aaKnown RBP eCLIP11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 GOLGA8FQ08AF8 430 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 GOLGA8DPQ0D2H9 430 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 ADIGQ0VDE8 80 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 PKDCCQ504Y2 493 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 TMEM215Q68D42 235 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 TTI2Q6NXR4 508 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 C11orf74Q86VG3 221 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 DENND1CQ8IV53 801 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 PGBD3Q8N328 593 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 KCNV2Q8TDN2 545 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 IPO4Q8TEX9 1081 aaKnown RBP11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 XPO6Q96QU8 1125 aaKnown RBP11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 TSG101Q99816 390 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 MARCH2Q9P0N8 246 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 WDR35Q9P2L0 1181 aa11.77□□□□□ -0.53
PCYT1A-215ENST00000488235 IGHV1OR15-9A0A0B4J2B8 117 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 SLC12A8A0AV02 714 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 YJEFN3A6XGL0 299 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 E7ENQ6 273 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 XPO1O14980 1071 aaKnown RBP11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 KHNYNO15037 678 aaKnown RBP11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 STX10O60499 249 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 ZBED1O96006 694 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 RALAP11233 206 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 TRIM21P19474 475 aaKnown RBP11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 PMLP29590 882 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 FMO5P49326 533 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 MFAP3P55082 362 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 LRRC63Q05C16 580 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 KLHL10Q6JEL2 608 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 LPCAT2Q7L5N7 544 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 SLC41A1Q8IVJ1 513 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 TTC39CQ8N584 583 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 RBBP8NLQ8NC74 664 aaPredicted RBP11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 SORCS1Q8WY21 1168 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 EDEM1Q92611 657 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 SPACA7Q96KW9 195 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 MRGPRX1Q96LB2 322 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 TIGD1Q96MW7 591 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 SFMBT1Q9UHJ3 866 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 PILRBQ9UKJ0 227 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 ASCC3Q8N3C0 2202 aaKnown RBP11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 DSPP15924 2871 aaKnown RBP11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 PLXND1Q9Y4D7 1925 aa11.76□□□□□ -0.53
PCYT1A-215ENST00000488235 GOLGA6L4A6NEF3 574 aa11.75□□□□□ -0.53
PCYT1A-215ENST00000488235 GFRA2O00451 464 aa11.75□□□□□ -0.53
PCYT1A-215ENST00000488235 BIN1O00499 593 aa11.75□□□□□ -0.53
PCYT1A-215ENST00000488235 MAP3K13O43283 966 aa11.75□□□□□ -0.53
PCYT1A-215ENST00000488235 MSI1O43347 362 aaKnown RBP11.75□□□□□ -0.53
PCYT1A-215ENST00000488235 KRT37O76014 449 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms