RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SEMA3BQ13214 749 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 PTK2BQ14289 1009 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 DHX8Q14562 1220 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 AASDHQ4L235 1098 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 ANO1Q5XXA6 986 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 SUMO4Q6EEV6 95 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 RINT1Q6NUQ1 792 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 FBXO42Q6P3S6 717 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 KRT27Q7Z3Y8 459 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 NRSN1Q8IZ57 195 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 WDR60Q8WVS4 1066 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 ZG16BQ96DA0 208 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 CINPQ9BW66 212 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 PPCSQ9HAB8 311 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 ARPP21Q9UBL0 812 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 VPS4AQ9UN37 437 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 PCDHB2Q9Y5E7 798 aa4.46□□□□□ -1.7
ECHDC1-217ENST00000488087 FNDC1Q4ZHG4 1894 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 ACKR2O00590 384 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 DNPH1O43598 174 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 CBFA2T3O75081 653 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 ANXA6P08133 673 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 ITGA2BP08514 1039 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 TMIGD3P0DMS9 266 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 KLRK1P26718 216 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 SERPINF1P36955 418 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 GRM4Q14833 912 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 TUBB8Q3ZCM7 444 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 TMEM119Q4V9L6 283 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 CCDC144NLQ6NUI1 221 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 TMEM65Q6PI78 240 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 KLHL17Q6TDP4 642 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 RD3Q7Z3Z2 195 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 BCDIN3DQ7Z5W3 292 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 CLASRPQ8N2M8 674 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 C12orf76Q8N812 135 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 MAFAQ8NHW3 353 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 OVCA2Q8WZ82 227 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 CCT6BQ92526 530 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 REPS1Q96D71 796 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 PRR11Q96HE9 360 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 SNX18Q96RF0 628 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 HERPUD2Q9BSE4 406 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 PAGR1Q9BTK6 254 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 FSCN3Q9NQT6 498 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 FBXO28Q9NVF7 368 aa4.45□□□□□ -1.7
ECHDC1-217ENST00000488087 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 LRRC3CA6NJW4 275 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 UBE2Q2LH0YL09 131 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 H7C1Q1 480 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 NBNO60934 754 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 TAF5LO75529 589 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 ITGA5P08648 1049 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 ALADP13716 330 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 GYS1P13807 737 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 MMP8P22894 467 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 GALNSP34059 522 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 IGHMBP2P38935 993 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 DNASE1L3Q13609 305 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 KCNJ12Q14500 433 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 TRIM71Q2Q1W2 868 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 TMEM63BQ5T3F8 832 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 FCRLBQ6BAA4 426 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 ERAP2Q6P179 960 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 PIK3AP1Q6ZUJ8 805 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 ADGRG3Q86Y34 549 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 CCDC117Q8IWD4 279 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 MYCT1Q8N699 235 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 NELL1Q92832 810 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 CCDC17Q96LX7 622 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 FYTTD1Q96QD9 318 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 KATNAL1Q9BW62 490 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 TP63Q9H3D4 680 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 R3HDMLQ9H3Y0 253 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 SAP30LQ9HAJ7 183 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 VPS45Q9NRW7 570 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 C11orf21Q9P2W6 132 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 SERGEFQ9UGK8 458 aa4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 SCAF8Q9UPN6 1271 aaKnown RBP4.44□□□□□ -1.7
ECHDC1-217ENST00000488087 FYB1O15117 783 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 CTIFO43310 598 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 PRAMEF2O60811 474 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 C1QL1O75973 258 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 CER1O95813 267 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 MT-CO3P00414 261 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 SLC3A2P08195 630 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 JAK3P52333 1124 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 INHBEP58166 350 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 GPC5P78333 572 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 RAE1P78406 368 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 CFHR3Q02985 330 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 CBFBQ13951 182 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 KCNB1Q14721 858 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 MFSD13AQ14CX5 517 aa4.43□□□□□ -1.7
ECHDC1-217ENST00000488087 FAM187BQ17R55 369 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms