RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 MT-ND5P03915 603 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 FAM90A13PP0C7W8 464 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 FAM90A24PP0C7X0 464 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 TMIGD3P0DMS9 266 aaPredicted RBP5.03□□□□□ -1.6
SMC4-219ENST00000487747 JAK3P52333 1124 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 WDR5P61964 334 aaKnown RBP5.03□□□□□ -1.6
SMC4-219ENST00000487747 DNASE1L3Q13609 305 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 SEMA3AQ14563 771 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 ODR4Q5SWX8 454 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 CCDC149Q6ZUS6 474 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 RBMXL3Q8N7X1 1067 aaKnown RBP5.03□□□□□ -1.6
SMC4-219ENST00000487747 SLC25A28Q96A46 364 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 ZDHHC12Q96GR4 267 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 GATA5Q9BWX5 397 aaPredicted RBP5.03□□□□□ -1.6
SMC4-219ENST00000487747 LRRC27Q9C0I9 530 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 ARL8BQ9NVJ2 186 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 RGS17Q9UGC6 210 aaPredicted RBP5.03□□□□□ -1.6
SMC4-219ENST00000487747 VPS4AQ9UN37 437 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 PCDHB2Q9Y5E7 798 aa5.03□□□□□ -1.6
SMC4-219ENST00000487747 SPATA31A1Q5TZJ5 1347 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 ZNF814B7Z6K7 855 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 PRR23D1E9PI22 279 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 PRR23D2P0DMB1 279 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 PBX1P40424 430 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 CACNB3P54284 484 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 B4GALNT1Q00973 533 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 GAB1Q13480 694 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 CLCA4Q14CN2 919 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 NFE2Q16621 373 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 KIAA0753Q2KHM9 967 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 ODF3L2Q3SX64 289 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 AASDHQ4L235 1098 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 UBAP2Q5T6F2 1119 aaKnown RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 P3H2Q8IVL5 708 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 FSTL5Q8N475 847 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 MAGEB6Q8N7X4 407 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 SMCR8Q8TEV9 937 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 FAM204AQ9H8W3 233 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 COG5Q9UP83 839 aa5.02□□□□□ -1.61
SMC4-219ENST00000487747 HEMK1Q9Y5R4 338 aaPredicted RBP5.02□□□□□ -1.61
SMC4-219ENST00000487747 A0A087WZ62 844 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 TPP1O14773 563 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 ST6GAL1P15907 406 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 CDKN2AP42771 156 aaKnown RBP5.01□□□□□ -1.61
SMC4-219ENST00000487747 GRM3Q14832 879 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 ACOX1Q15067 660 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 DAB2IPQ5VWQ8 1189 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 FAM57BQ71RH2 274 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMC4-219ENST00000487747 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 SUN3Q8TAQ9 357 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 ASB5Q8WWX0 329 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 MSI2Q96DH6 328 aaKnown RBP5.01□□□□□ -1.61
SMC4-219ENST00000487747 MSLNLQ96KJ4 702 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 SNX22Q96L94 193 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 CINPQ9BW66 212 aaPredicted RBP5.01□□□□□ -1.61
SMC4-219ENST00000487747 MSRB1Q9NZV6 116 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 ZNF212Q9UDV6 495 aa5.01□□□□□ -1.61
SMC4-219ENST00000487747 TRIP12Q14669 1992 aaPredicted RBP5□□□□□ -1.61
SMC4-219ENST00000487747 TCF20Q9UGU0 1960 aaKnown RBP5□□□□□ -1.61
SMC4-219ENST00000487747 PRYO14603 147 aa5□□□□□ -1.61
SMC4-219ENST00000487747 WDR47O94967 919 aa5□□□□□ -1.61
SMC4-219ENST00000487747 NDUFB8O95169 186 aa5□□□□□ -1.61
SMC4-219ENST00000487747 CD63P08962 238 aa5□□□□□ -1.61
SMC4-219ENST00000487747 RPS6KB1P23443 525 aa5□□□□□ -1.61
SMC4-219ENST00000487747 PEX2P28328 305 aa5□□□□□ -1.61
SMC4-219ENST00000487747 MTA1Q13330 715 aa5□□□□□ -1.61
SMC4-219ENST00000487747 GALEQ14376 348 aa5□□□□□ -1.61
SMC4-219ENST00000487747 RRAGBQ5VZM2 374 aa5□□□□□ -1.61
SMC4-219ENST00000487747 NXNQ6DKJ4 435 aa5□□□□□ -1.61
SMC4-219ENST00000487747 RBM44Q6ZP01 1051 aaKnown RBP5□□□□□ -1.61
SMC4-219ENST00000487747 TCEAL8Q8IYN2 117 aa5□□□□□ -1.61
SMC4-219ENST00000487747 FAM177A1Q8N128 213 aaPredicted RBP5□□□□□ -1.61
SMC4-219ENST00000487747 MBD3L2Q8NHZ7 208 aaPredicted RBP5□□□□□ -1.61
SMC4-219ENST00000487747 PIGKQ92643 395 aa5□□□□□ -1.61
SMC4-219ENST00000487747 FAM227BQ96M60 508 aa5□□□□□ -1.61
SMC4-219ENST00000487747 ABHD10Q9NUJ1 306 aa5□□□□□ -1.61
SMC4-219ENST00000487747 WWOXQ9NZC7 414 aa5□□□□□ -1.61
SMC4-219ENST00000487747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.99□□□□□ -1.61
SMC4-219ENST00000487747 TMEM272A0A1B0GTI8 110 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 GOLIM4O00461 696 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 CBFA2T3O75081 653 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 EPN2O95208 641 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 VPS41P49754 854 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 MANEAQ5SRI9 462 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 MZT2AQ6P582 158 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 DARS2Q6PI48 645 aaKnown RBP4.99□□□□□ -1.61
SMC4-219ENST00000487747 CHST15Q7LFX5 561 aaPredicted RBP4.99□□□□□ -1.61
SMC4-219ENST00000487747 P2RY11Q96G91 374 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 NLRP4Q96MN2 994 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 SLC25A32Q9H2D1 315 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 MOV10Q9HCE1 1003 aaKnown RBP4.99□□□□□ -1.61
SMC4-219ENST00000487747 TMEM8AQ9HCN3 771 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 PCDHGB6Q9Y5F9 930 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 EID1Q9Y6B2 187 aa4.99□□□□□ -1.61
SMC4-219ENST00000487747 EVPLQ92817 2033 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 TRBV5-3A0A0A0MS03 114 aa4.98□□□□□ -1.61
SMC4-219ENST00000487747 A0A0G2JK05 382 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms