RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 ZNF653Q96CK0 615 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 PGAP3Q96FM1 320 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SERPINB11Q96P15 392 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 NPY6RQ99463 290 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 PLA2G2FQ9BZM2 168 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SMG9Q9H0W8 520 aaKnown RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 LUC7LQ9NQ29 371 aaKnown RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 METTL5Q9NRN9 209 aaKnown RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 THG1LQ9NWX6 298 aaKnown RBP13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SMPD4Q9NXE4 827 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 RASAL2Q9UJF2 1139 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 STAP1Q9ULZ2 295 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 TLR6Q9Y2C9 796 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 NUMBLQ9Y6R0 609 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
COL4A6-207ENST00000487645 SLC12A8A0AV02 714 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 TMEM191CA6NGB0 347 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 C2CD4BA6NLJ0 364 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 MDM4O15151 490 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 NRDCO43847 1150 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 STC2O76061 302 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 IPO7O95373 1038 aaKnown RBP13.88□□□□□ -0.19
COL4A6-207ENST00000487645 TRUB2O95900 331 aaKnown RBP13.88□□□□□ -0.19
COL4A6-207ENST00000487645 IGLV3-27P01718 113 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 TMEM253P0C7T8 217 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 PDGFRAP16234 1089 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 PSMC3P17980 439 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 ABCB4P21439 1286 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 MAGEA1P43355 309 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 RING1Q06587 406 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 FCHO2Q0JRZ9 810 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 USP4Q13107 963 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 TRIP4Q15650 581 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-207ENST00000487645 ZNF77Q15935 545 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 DCUN1D2Q6PH85 259 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 RAD9BQ6WBX8 426 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 HTR3DQ70Z44 454 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 JOSD2Q8TAC2 188 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 RXFP2Q8WXD0 754 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 CTNNBL1Q8WYA6 563 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-207ENST00000487645 PLD4Q96BZ4 506 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 RSPRY1Q96DX4 576 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 LRRC3BQ96PB8 259 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 KXD1Q9BQD3 176 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 RPP25Q9BUL9 199 aaKnown RBP13.88□□□□□ -0.19
COL4A6-207ENST00000487645 TRMT61BQ9BVS5 477 aaKnown RBP13.88□□□□□ -0.19
COL4A6-207ENST00000487645 DCLK3Q9C098 648 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 MYO1AQ9UBC5 1043 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 ZNF510Q9Y2H8 683 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
COL4A6-207ENST00000487645 M0QYT0 321 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 SLC9A3R1O14745 358 aaPredicted RBP13.87□□□□□ -0.19
COL4A6-207ENST00000487645 CHADO15335 359 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 ENDOD1O94919 500 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 SLC2A3P11169 496 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 DESP17661 470 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 GPD1P21695 349 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 SDC4P31431 198 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 FLT3P36888 993 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 PTPN9P43378 593 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 ZNF143P52747 638 aaPredicted RBP13.87□□□□□ -0.19
COL4A6-207ENST00000487645 RPL7AP62424 266 aaKnown RBP13.87□□□□□ -0.19
COL4A6-207ENST00000487645 KRT83P78385 493 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 TDGQ13569 410 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 ARHGAP29Q52LW3 1261 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 TRNP1Q6NT89 227 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 BNIPLQ7Z465 357 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 TAC4Q86UU9 113 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 UNC45BQ8IWX7 931 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 YAF2Q8IY57 180 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 GJD3Q8N144 294 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 EMC1Q8N766 993 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 FNIP1Q8TF40 1166 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 CENPIQ92674 756 aaPredicted RBP13.87□□□□□ -0.19
COL4A6-207ENST00000487645 AZIN2Q96A70 460 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 OTUB2Q96DC9 234 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 CNPY3Q9BT09 278 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL4A6-207ENST00000487645 CFAP97Q9P2B7 532 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 TBC1D14Q9P2M4 693 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 UVRAGQ9P2Y5 699 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 LSM7Q9UK45 103 aaKnown RBP13.87□□□□□ -0.19
COL4A6-207ENST00000487645 PCDHA13Q9Y5I0 950 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 NCOR1O75376 2440 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 TRIOO75962 3097 aa13.87□□□□□ -0.19
COL4A6-207ENST00000487645 ARHGAP6O43182 974 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 IRAK2O43187 625 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 ATMINO43313 823 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-207ENST00000487645 GREM1O60565 184 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 GJB6O95452 261 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 LATS1O95835 1130 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 HARS2P49590 506 aaKnown RBP13.86□□□□□ -0.19
COL4A6-207ENST00000487645 TBX4P57082 545 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 PITX1P78337 314 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-207ENST00000487645 DEUP1Q05D60 604 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 MTA1Q13330 715 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms