RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ACSS3Q9H6R3 686 aa12.19□□□□□ -0.46
TRA2B-214ENST00000487615 NRDE2Q9H7Z3 1164 aa12.19□□□□□ -0.46
TRA2B-214ENST00000487615 POPDC2Q9HBU9 364 aa12.19□□□□□ -0.46
TRA2B-214ENST00000487615 DERAQ9Y315 318 aa12.19□□□□□ -0.46
TRA2B-214ENST00000487615 CDY2AQ9Y6F7 541 aa12.19□□□□□ -0.46
TRA2B-214ENST00000487615 CDY1Q9Y6F8 540 aa12.19□□□□□ -0.46
TRA2B-214ENST00000487615 KCNK1O00180 336 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 TRDMT1O14717 391 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 PMPCBO75439 489 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 HMBSP08397 361 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 SLC2A3P11169 496 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 TSHRP16473 764 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 PTPN1P18031 435 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 RPA3P35244 121 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 ZC3H12AQ5D1E8 599 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 HASPINQ8TF76 798 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 SKA2Q8WVK7 121 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 ZNF75CPQ92670 426 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 TLCD1Q96CP7 247 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 CCDC124Q96CT7 223 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 STRA6Q9BX79 667 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 AAR2Q9Y312 384 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 TIMM44O43615 452 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 PPARGP37231 505 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 CUL3Q13618 768 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 DLK2Q6UY11 383 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 MTDHQ86UE4 582 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 MYLK4Q86YV6 388 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 SLC4A11Q8NBS3 891 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 CALML6Q8TD86 181 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 SRPK1Q96SB4 655 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 TSPYL2Q9H2G4 693 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 ABCF3Q9NUQ8 709 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 BANF1O75531 89 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 MMP3P08254 477 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 NPR3P17342 541 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 MAP2K5Q13163 448 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 TRABD2AQ86V40 505 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 B3GALNT2Q8NCR0 500 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 ADAM32Q8TC27 787 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 WNT8BQ93098 351 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 ULBP1Q9BZM6 244 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 NXF3Q9H4D5 531 aaKnown RBP12.18□□□□□ -0.46
TRA2B-214ENST00000487615 CD248Q9HCU0 757 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 TRPV2Q9Y5S1 764 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 STYXL1Q9Y6J8 313 aa12.18□□□□□ -0.46
TRA2B-214ENST00000487615 C22orf31O95567 290 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 POMCP01189 267 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 RAB27AP51159 221 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 GEMP55040 296 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 CDK16Q00536 496 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 MGAT5BQ3V5L5 792 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 WSCD1Q658N2 575 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 OVOS1Q6IE37 1185 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 PRPF39Q86UA1 669 aaKnown RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 PACS2Q86VP3 889 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 TMEM86AQ8N2M4 240 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 RMDN1Q96DB5 314 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 FAXDC2Q96IV6 333 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 SEPT5Q99719 369 aaPredicted RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 MRPL45Q9BRJ2 306 aaKnown RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 PRDM16Q9HAZ2 1276 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 LRRC4CQ9HCJ2 640 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 KCNH4Q9UQ05 1017 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 NRAPQ86VF7 1730 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 UBA6A0AVT1 1052 aaPredicted RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 TSPAN1O60635 241 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 ARIH2O95376 493 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 CPA2P48052 419 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 SERPINB8P50452 374 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 FAM110CQ1W6H9 321 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 KIF19Q2TAC6 998 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 C1orf220Q5T0J3 134 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 TSPAN17Q96FV3 270 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 ELMO2Q96JJ3 720 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 NOL3O60936 208 aaKnown RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 RGS20O76081 388 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 ATG7O95352 703 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 LTFP02788 710 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 NOMO1Q15155 1222 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 TCEAL1Q15170 157 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 ARHGAP18Q8N392 663 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 THTPAQ9BU02 230 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 VANGL2Q9ULK5 521 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 NEMP1O14524 444 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 APOA4P06727 396 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 ALADP13716 330 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 DARSP14868 501 aaKnown RBP12.17□□□□□ -0.46
TRA2B-214ENST00000487615 QPCTQ16769 361 aa12.17□□□□□ -0.46
TRA2B-214ENST00000487615 SLC10A6Q3KNW5 377 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms