RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ARMCX6Q7L4S7 300 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 TMEFF1Q8IYR6 380 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 SIX6OS1Q8N1H7 587 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 UBA3Q8TBC4 463 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 RNF139Q8WU17 664 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 SLC35C1Q96A29 364 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 ULBP1Q9BZM6 244 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 MBD1Q9UIS9 605 aaPredicted RBP13.05□□□□□ -0.32
SREBF1-215ENST00000487401 MAN1B1Q9UKM7 699 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 AGO1Q9UL18 857 aaKnown RBP13.05□□□□□ -0.32
SREBF1-215ENST00000487401 PCDHB4Q9Y5E5 795 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 NCOR2Q9Y618 2525 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 A0A1W2PQF6 199 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 PRRT4C9JH25 899 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 TM4SF5O14894 197 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 DPP6P42658 865 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 FMO5P49326 533 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 HARS2P49590 506 aaKnown RBP13.04□□□□□ -0.32
SREBF1-215ENST00000487401 PM20D1Q6GTS8 502 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 TMEM270Q6UE05 265 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 SLC36A4Q6YBV0 504 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 DENND1CQ8IV53 801 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 FRMD1Q8N878 549 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
SREBF1-215ENST00000487401 NELFBQ8WX92 580 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 NDRG1Q92597 394 aaKnown RBP13.04□□□□□ -0.32
SREBF1-215ENST00000487401 NT5C1BQ96P26 610 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 ACOX2Q99424 681 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 LSM14BQ9BX40 385 aaKnown RBP13.04□□□□□ -0.32
SREBF1-215ENST00000487401 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
SREBF1-215ENST00000487401 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 HCN2Q9UL51 889 aa13.04□□□□□ -0.32
SREBF1-215ENST00000487401 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
SREBF1-215ENST00000487401 BICDL2A1A5D9 508 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 TULP2O00295 520 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 O00370 1275 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 GFRA2O00451 464 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 PMM2O15305 246 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 AP5Z1O43299 807 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 ZNF217O75362 1048 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 PENKP01210 267 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-215ENST00000487401 PAEPP09466 180 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 LCP1P13796 627 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
SREBF1-215ENST00000487401 GABRG2P18507 467 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 PTGER3P43115 390 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
SREBF1-215ENST00000487401 ADIGQ0VDE8 80 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 E2F5Q15329 346 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 FYB2Q5VWT5 728 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 LCLAT1Q6UWP7 414 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 SYT12Q8IV01 421 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 FMNL3Q8IVF7 1028 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 PPM1KQ8N3J5 372 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 DDI1Q8WTU0 396 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 UCMAQ8WVF2 138 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 PLD4Q96BZ4 506 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 ERLEC1Q96DZ1 483 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 CNTNAP3BQ96NU0 1288 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 GABRG3Q99928 467 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 NUSAP1Q9BXS6 441 aaKnown RBP13.03□□□□□ -0.32
SREBF1-215ENST00000487401 CNTNAP3Q9BZ76 1288 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 TMEM9BQ9NQ34 198 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 FBXO10Q9UK96 956 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 SLC27A6Q9Y2P4 619 aa13.03□□□□□ -0.32
SREBF1-215ENST00000487401 LNP1A1A4G5 178 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 PATE3B3GLJ2 98 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 BIN1O00499 593 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 NPC1O15118 1278 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 P4HA2O15460 535 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 KCNK5O95279 499 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 GNA14O95837 355 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 IRX4P78413 519 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 LMAN2Q12907 356 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 STARD3Q14849 445 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 TRIP4Q15650 581 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-215ENST00000487401 CNGA2Q16280 664 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 TRIM61Q5EBN2 209 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 N4BP2L1Q5TBK1 243 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-215ENST00000487401 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 CPXM2Q8N436 756 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 DEFB119Q8N690 84 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 UBR7Q8N806 425 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 KCTD13Q8WZ19 329 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 EDEM1Q92611 657 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 CNGB3Q9NQW8 809 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 EVLQ9UI08 416 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-215ENST00000487401 CTNND2Q9UQB3 1225 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 HBS1LQ9Y450 684 aaKnown RBP13.02□□□□□ -0.33
SREBF1-215ENST00000487401 RAD54BQ9Y620 910 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 STON1Q9Y6Q2 735 aa13.02□□□□□ -0.33
SREBF1-215ENST00000487401 YJEFN3A6XGL0 299 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms