RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CTC1Q2NKJ3 1217 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 SV2CQ496J9 727 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 PLEKHG4Q58EX7 1191 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 GLRA4Q5JXX5 417 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 TTC39BQ5VTQ0 682 aaPredicted RBP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 LIMS2Q7Z4I7 341 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 NSMCE1Q8WV22 266 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 N4BP2L2Q92802 583 aaPredicted RBP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 C11orf84Q9BUA3 381 aaPredicted RBP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 KLC2Q9H0B6 622 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 PIN4Q9Y237 131 aaKnown RBP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 HAS3O00219 553 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 PRKCHP24723 683 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 TAF6P49848 677 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 NRLP54845 237 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 PRKD1Q15139 912 aaPredicted RBP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 DPYSL2Q16555 572 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 TAF1BQ53T94 588 aaPredicted RBP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 WASHC2DQ5SRD0 308 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 MORN1Q5T089 497 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 CLNKQ7Z7G1 428 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 TLK2Q86UE8 772 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 KBTBD7Q8WVZ9 684 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 DNAJB3Q8WWF6 145 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 PTPN18Q99952 460 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 APOL6Q9BWW8 343 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 TSSK1BQ9BXA7 367 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 PRDM16Q9HAZ2 1276 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 RAB6BQ9NRW1 208 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 MKS1Q9NXB0 559 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 GOLGA8RI6L899 631 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 FAM163BP0C2L3 166 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 NR2C2P49116 596 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 SLC8A3P57103 927 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 NME8Q8N427 588 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 APPL2Q8NEU8 664 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 TNIP3Q96KP6 325 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 KLF6Q99612 283 aaPredicted RBP27.05■■□□□ 1.92
HLA-C-208ENST00000487245 TBC1D10AQ9BXI6 508 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 DPEP3Q9H4B8 488 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 NRDE2Q9H7Z3 1164 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 POPDC2Q9HBU9 364 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 MTO1Q9Y2Z2 717 aaKnown RBP27.05■■□□□ 1.92
HLA-C-208ENST00000487245 HEY1Q9Y5J3 304 aa27.05■■□□□ 1.92
HLA-C-208ENST00000487245 E7ENQ6 273 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 AKAP5P24588 427 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 CPT1AP50416 773 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 EFHC1Q5JVL4 640 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 MAB21L3Q8N8X9 362 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 CFAP61Q8NHU2 1237 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 PTPRN2Q92932 1015 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 B3GNT5Q9BYG0 378 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 ETNK2Q9NVF9 386 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 WDR91A4D1P6 747 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 PIAS1O75925 651 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 PDGFRBP09619 1106 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 CYP2F1P24903 491 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 RBL1P28749 1068 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 L1CAMP32004 1257 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 CRYBB1P53674 252 aaPredicted RBP27.04■■□□□ 1.92
HLA-C-208ENST00000487245 CA9Q16790 459 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 FAM13CQ8NE31 585 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 RFWD2Q8NHY2 731 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 GTF2IRD1Q9UHL9 959 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 Q9Y3F1 56 aa27.04■■□□□ 1.92
HLA-C-208ENST00000487245 ADORA2BP29275 332 aa27.03■■□□□ 1.92
HLA-C-208ENST00000487245 CCNFP41002 786 aa27.03■■□□□ 1.92
HLA-C-208ENST00000487245 PRAMEF19Q5SWL8 479 aa27.03■■□□□ 1.92
HLA-C-208ENST00000487245 FAM91A1Q658Y4 838 aa27.03■■□□□ 1.92
HLA-C-208ENST00000487245 STRADAQ7RTN6 431 aa27.03■■□□□ 1.92
HLA-C-208ENST00000487245 MTDHQ86UE4 582 aaKnown RBP27.03■■□□□ 1.92
HLA-C-208ENST00000487245 CAND1Q86VP6 1230 aaKnown RBP27.03■■□□□ 1.92
HLA-C-208ENST00000487245 LONP2Q86WA8 852 aa27.03■■□□□ 1.92
HLA-C-208ENST00000487245 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.03■■□□□ 1.92
HLA-C-208ENST00000487245 HUS1O60921 280 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 SNRPAP09012 282 aaKnown RBP27.02■■□□□ 1.92
HLA-C-208ENST00000487245 CCDC130P13994 396 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 MAGEA3P43357 314 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 UBXN11Q5T124 520 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 LGSNQ5TDP6 509 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 LRRC6Q86X45 466 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 KATNAL1Q9BW62 490 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 RNPEPL1Q9HAU8 725 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 KRT37O76014 449 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 CBX6O95503 412 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 ZNF865P0CJ78 1059 aaPredicted RBP27.02■■□□□ 1.92
HLA-C-208ENST00000487245 PYGBP11216 843 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 LCP1P13796 627 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 WARSP23381 471 aaKnown RBP27.02■■□□□ 1.92
HLA-C-208ENST00000487245 MTM1Q13496 603 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 PPP6R3Q5H9R7 873 aaPredicted RBP27.02■■□□□ 1.92
HLA-C-208ENST00000487245 TRIM42Q8IWZ5 723 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 TOP6BLQ8N6T0 577 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 SKA1Q96BD8 255 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 AP5M1Q9H0R1 490 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 C12orf65Q9H3J6 166 aaKnown RBP27.02■■□□□ 1.92
HLA-C-208ENST00000487245 DHX35Q9H5Z1 703 aaKnown RBP27.02■■□□□ 1.92
HLA-C-208ENST00000487245 KCNK13Q9HB14 408 aa27.02■■□□□ 1.92
HLA-C-208ENST00000487245 ZC3H7BQ9UGR2 993 aaKnown RBP27.02■■□□□ 1.92
HLA-C-208ENST00000487245 AP4E1Q9UPM8 1137 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms