RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TNK2Q07912 1038 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 GRSF1Q12849 480 aaKnown RBP eCLIP15.28■□□□□ 0.04
LIMS3-205ENST00000487150 UBXN2BQ14CS0 331 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 TSR1Q2NL82 804 aaKnown RBP15.28■□□□□ 0.04
LIMS3-205ENST00000487150 NUDT18Q6ZVK8 323 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 FAM183BPQ6ZVS7 135 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 ARCQ7LC44 396 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 RIN3Q8TB24 985 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 CLEC4CQ8WTT0 213 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 SLC20A1Q8WUM9 679 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 SLC2A13Q96QE2 648 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 LRFN3Q9BTN0 628 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 LTB4R2Q9NPC1 389 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 NUDT5Q9UKK9 219 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 TLR6Q9Y2C9 796 aa15.28■□□□□ 0.04
LIMS3-205ENST00000487150 ANKRD62A6NC57 917 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 MDM4O15151 490 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 HOXC11O43248 304 aaPredicted RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 APOEP02649 317 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 CYBBP04839 570 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 ADH5P11766 374 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 ARSAP15289 507 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 GSCP56915 257 aaPredicted RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 GAD2Q05329 585 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 DHCR24Q15392 516 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 CLEC16AQ2KHT3 1053 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 DCAF6Q58WW2 860 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 FAM102AQ5T9C2 384 aaPredicted RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 CWF19L1Q69YN2 538 aaKnown RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 TRIM68Q6AZZ1 485 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 Q6ZNB5 142 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 IRF2BP2Q7Z5L9 587 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 PHF13Q86YI8 300 aaPredicted RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 BBS7Q8IWZ6 715 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 DQX1Q8TE96 717 aaKnown RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 NDRG1Q92597 394 aaKnown RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 TRIM11Q96F44 468 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 TRIM5Q9C035 493 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 KCNH6Q9H252 994 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 ZNHIT6Q9NWK9 470 aaKnown RBP15.27■□□□□ 0.04
LIMS3-205ENST00000487150 HCN4Q9Y3Q4 1203 aa15.27■□□□□ 0.04
LIMS3-205ENST00000487150 OBSL1O75147 1896 aa15.27■□□□□ 0.03
LIMS3-205ENST00000487150 IRAK2O43187 625 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 IGLV3-27P01718 113 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 CYP17A1P05093 508 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 UNGP13051 313 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-205ENST00000487150 CHRNB2P17787 502 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 DRD1P21728 446 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 NOS2P35228 1153 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 MATKP42679 507 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 RPS9P46781 194 aaKnown RBP15.26■□□□□ 0.03
LIMS3-205ENST00000487150 TBX4P57082 545 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 FBXO43Q4G163 708 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 DGKKQ5KSL6 1271 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 ACBD5Q5T8D3 534 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-205ENST00000487150 MMS22LQ6ZRQ5 1243 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 XYLT1Q86Y38 959 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 VSTM4Q8IW00 320 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 ADGRG2Q8IZP9 1017 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 SYNPOQ8N3V7 929 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 CPXM2Q8N436 756 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 ZNF557Q8N988 423 aaPredicted RBP15.26■□□□□ 0.03
LIMS3-205ENST00000487150 AZIN2Q96A70 460 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 VCPIP1Q96JH7 1222 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 FAM204AQ9H8W3 233 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 SPHK2Q9NRA0 654 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 ADAM22Q9P0K1 906 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 SLC12A6Q9UHW9 1150 aa15.26■□□□□ 0.03
LIMS3-205ENST00000487150 TECTAO75443 2155 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 MYO16Q9Y6X6 1858 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 TYW5A2RUC4 315 aaKnown RBP15.25■□□□□ 0.03
LIMS3-205ENST00000487150 FAM170BA6NMN3 283 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 TRDMT1O14717 391 aaKnown RBP15.25■□□□□ 0.03
LIMS3-205ENST00000487150 GREM1O60565 184 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 F9P00740 461 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 GYPCP04921 128 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 SERPING1P05155 500 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 HMBSP08397 361 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 GJA4P35212 333 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 E2F5Q15329 346 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIMS3-205ENST00000487150 TAC4Q86UU9 113 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 CNGA4Q8IV77 575 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 XPO6Q96QU8 1125 aaKnown RBP15.25■□□□□ 0.03
LIMS3-205ENST00000487150 P2RY13Q9BPV8 354 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.25■□□□□ 0.03
LIMS3-205ENST00000487150 MARK1Q9P0L2 795 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 SFMBT1Q9UHJ3 866 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 STOML2Q9UJZ1 356 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 NAALADL1Q9UQQ1 740 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 MYH10P35580 1976 aa15.25■□□□□ 0.03
LIMS3-205ENST00000487150 DENND4CQ5VZ89 1909 aa15.24■□□□□ 0.03
LIMS3-205ENST00000487150 MSI1O43347 362 aaKnown RBP15.24■□□□□ 0.03
LIMS3-205ENST00000487150 TRUB2O95900 331 aaKnown RBP15.24■□□□□ 0.03
LIMS3-205ENST00000487150 PDGFBP01127 241 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms