RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 GRIA2P42262 883 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 ANO6Q4KMQ2 910 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 DPY19L2P1Q6NXN4 242 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 ETFBKMTQ8IXQ9 262 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 XPO6Q96QU8 1125 aaKnown RBP23.4■■□□□ 1.34
CDHR3-212ENST00000487084 DNAJC17Q9NVM6 304 aaKnown RBP23.4■■□□□ 1.34
CDHR3-212ENST00000487084 PLK2Q9NYY3 685 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 WDR35Q9P2L0 1181 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 DEC1Q9P2X7 70 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 AGO1Q9UL18 857 aaKnown RBP23.4■■□□□ 1.34
CDHR3-212ENST00000487084 ATG2BQ96BY7 2078 aa23.4■■□□□ 1.34
CDHR3-212ENST00000487084 TBC1D3BA6NDS4 549 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 ANTXRLA6NF34 631 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 E5RJQ4 531 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 SART1O43290 800 aaKnown RBP23.39■■□□□ 1.33
CDHR3-212ENST00000487084 NCAM1P13591 858 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 CLCN1P35523 988 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 KRT9P35527 623 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 HARS2P49590 506 aaKnown RBP23.39■■□□□ 1.33
CDHR3-212ENST00000487084 KLK7P49862 253 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 COPB1P53618 953 aaKnown RBP23.39■■□□□ 1.33
CDHR3-212ENST00000487084 PDCLQ13371 301 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 FAM71AQ8IYT1 594 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 USP33Q8TEY7 942 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 STK32AQ8WU08 396 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 HHIPQ96QV1 700 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 SLC4A5Q9BY07 1137 aa23.39■■□□□ 1.33
CDHR3-212ENST00000487084 NAT10Q9H0A0 1025 aaKnown RBP23.39■■□□□ 1.33
CDHR3-212ENST00000487084 HBS1LQ9Y450 684 aaKnown RBP23.39■■□□□ 1.33
CDHR3-212ENST00000487084 TRIM24O15164 1050 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 CHKAP35790 457 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 PXNP49023 591 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-212ENST00000487084 RPL34P49207 117 aaKnown RBP23.38■■□□□ 1.33
CDHR3-212ENST00000487084 TRIP4Q15650 581 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-212ENST00000487084 PREPLQ4J6C6 727 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-212ENST00000487084 GRAMD4Q6IC98 578 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 CCDC33Q8N5R6 958 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 C1orf131Q8NDD1 294 aaKnown RBP23.38■■□□□ 1.33
CDHR3-212ENST00000487084 PCMTD1Q96MG8 357 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-212ENST00000487084 PDCL3Q9H2J4 239 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 FAM207AQ9NSI2 230 aaPredicted RBP23.38■■□□□ 1.33
CDHR3-212ENST00000487084 MARK1Q9P0L2 795 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 PCDHGC3Q9UN70 934 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 CEP83Q9Y592 693 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 DMDP11532 3685 aa23.38■■□□□ 1.33
CDHR3-212ENST00000487084 CACNG3O60359 315 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 LILRB5O75023 590 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 TIE1P35590 1138 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 BPIFB4P59827 614 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 DMC1Q14565 340 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 C10orf76Q5T2E6 689 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 MSANTD2Q6P1R3 559 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 LONP2Q86WA8 852 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 PHTF2Q8N3S3 785 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 HINFPQ9BQA5 517 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 NAA15Q9BXJ9 866 aaKnown RBP23.37■■□□□ 1.33
CDHR3-212ENST00000487084 PLCB1Q9NQ66 1216 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 TJP2Q9UDY2 1190 aa23.37■■□□□ 1.33
CDHR3-212ENST00000487084 LIMA1Q9UHB6 759 aaKnown RBP23.37■■□□□ 1.33
CDHR3-212ENST00000487084 CAPN9O14815 690 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 PAPSS1O43252 624 aaPredicted RBP23.36■■□□□ 1.33
CDHR3-212ENST00000487084 NCAPHQ15003 741 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 SMYD5Q6GMV2 418 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 NUDT18Q6ZVK8 323 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 SYT13Q7L8C5 426 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 TMEM110Q86TL2 294 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 TERB1Q8NA31 727 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 PPP1R13BQ96KQ4 1090 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 NOX5Q96PH1 765 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 CPXM1Q96SM3 734 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 STK33Q9BYT3 514 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 GANQ9H2C0 597 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 ZDHHC4Q9NPG8 344 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 NAALADL1Q9UQQ1 740 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 VPS13AQ96RL7 3174 aa23.36■■□□□ 1.33
CDHR3-212ENST00000487084 F8VZ95 297 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 KLF8O95600 359 aaPredicted RBP23.35■■□□□ 1.33
CDHR3-212ENST00000487084 CYBBP04839 570 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 TNFRSF4P43489 277 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 DGKGP49619 791 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 POLR2FP61218 127 aaKnown RBP23.35■■□□□ 1.33
CDHR3-212ENST00000487084 MRPS21P82921 87 aaKnown RBP23.35■■□□□ 1.33
CDHR3-212ENST00000487084 SRSF5Q13243 272 aaKnown RBP23.35■■□□□ 1.33
CDHR3-212ENST00000487084 EMC10Q5UCC4 262 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 TAF3Q5VWG9 929 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 PRR23BQ6ZRT6 265 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 WDTC1Q8N5D0 677 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 ALLCQ8N6M5 410 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 DQX1Q8TE96 717 aaKnown RBP23.35■■□□□ 1.33
CDHR3-212ENST00000487084 TRIM62Q9BVG3 475 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 LHX5Q9H2C1 402 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 SYNCQ9H7C4 482 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 SMG5Q9UPR3 1016 aaKnown RBP23.35■■□□□ 1.33
CDHR3-212ENST00000487084 FANCMQ8IYD8 2048 aa23.35■■□□□ 1.33
CDHR3-212ENST00000487084 FAM170AA1A519 330 aa23.34■■□□□ 1.33
CDHR3-212ENST00000487084 LGALS16A8MUM7 142 aa23.34■■□□□ 1.33
CDHR3-212ENST00000487084 FYNP06241 537 aa23.34■■□□□ 1.33
CDHR3-212ENST00000487084 CYP11B1P15538 503 aa23.34■■□□□ 1.33
CDHR3-212ENST00000487084 ZNF18P17022 549 aa23.34■■□□□ 1.33
CDHR3-212ENST00000487084 HOXA6P31267 233 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms