RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 C5orf60A6NFR6 353 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 POMCP01189 267 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 CYP11A1P05108 521 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 GCAP28676 217 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 DAOAP59103 153 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 TUSC3Q13454 348 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 RASA2Q15283 850 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 TMED2Q15363 201 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 MSS51Q4VC12 460 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 SLC45A4Q5BKX6 768 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 RAB41Q5JT25 222 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 VSTM1Q6UX27 236 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 CYP4X1Q8N118 509 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 ULBP1Q9BZM6 244 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 SLC24A2Q9UI40 661 aa21.12■□□□□ 0.97
HPS3-206ENST00000486530 RRP15Q9Y3B9 282 aaKnown RBP21.12■□□□□ 0.97
HPS3-206ENST00000486530 TMEM120BA0PK00 339 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 BANF1O75531 89 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 B3GAT3O94766 335 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 GPX6P59796 221 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 CBLBQ13191 982 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 MICALCLQ6ZW33 695 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 FBXO36Q8NEA4 188 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 ZMIZ2Q8NF64 920 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 MAML1Q92585 1016 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 QKIQ96PU8 341 aaKnown RBP eCLIP21.11■□□□□ 0.97
HPS3-206ENST00000486530 ACBD6Q9BR61 282 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 KLC2Q9H0B6 622 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 TRPV6Q9H1D0 765 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 PTPRDP23468 1912 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 ATXN2Q99700 1313 aaKnown RBP21.11■□□□□ 0.97
HPS3-206ENST00000486530 A0A1W2PQ45 241 aaPredicted RBP21.11■□□□□ 0.97
HPS3-206ENST00000486530 A0A1W2PQY0 241 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 M0QYT0 321 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 BRAFP15056 766 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 GOT1P17174 413 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 GBE1Q04446 702 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 BBS9Q3SYG4 887 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 NCBP2-AS2Q69YL0 99 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 CAPN12Q6ZSI9 719 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 BZW1Q7L1Q6 419 aaKnown RBP21.11■□□□□ 0.97
HPS3-206ENST00000486530 ECHDC2Q86YB7 292 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 RAB6BQ9NRW1 208 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 GGA2Q9UJY4 613 aa21.11■□□□□ 0.97
HPS3-206ENST00000486530 ZNF638Q14966 1978 aaKnown RBP21.11■□□□□ 0.97
HPS3-206ENST00000486530 PATJQ8NI35 1801 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 ARHGEF37A1IGU5 675 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 C9IYK1 514 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 H3BRJ5 948 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 M0QZQ0 153 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 INPPL1O15357 1258 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 MAP3K6O95382 1288 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 ATP2A2P16615 1042 aaKnown RBP21.1■□□□□ 0.97
HPS3-206ENST00000486530 MAGEA6P43360 314 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 AIF1P55008 147 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 DEUP1Q05D60 604 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 EFHC2Q5JST6 749 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 SRRM1Q8IYB3 904 aaKnown RBP21.1■□□□□ 0.97
HPS3-206ENST00000486530 MYLPFQ96A32 169 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 ZNF317Q96PQ6 595 aaPredicted RBP21.1■□□□□ 0.97
HPS3-206ENST00000486530 SLC9A7Q96T83 725 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 PRMT1Q99873 361 aaKnown RBP21.1■□□□□ 0.97
HPS3-206ENST00000486530 RTP3Q9BQQ7 232 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 WDR83Q9BRX9 315 aaKnown RBP21.1■□□□□ 0.97
HPS3-206ENST00000486530 CSNK1G1Q9HCP0 422 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 INPP5FQ9Y2H2 1132 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 TRIM17Q9Y577 477 aa21.1■□□□□ 0.97
HPS3-206ENST00000486530 HACD1B0YJ81 288 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 RASA4BC9J798 803 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 POC1B-GALNT4F8VUJ3 575 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 NRP1O14786 923 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 CAPN9O14815 690 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 RASA4O43374 803 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 CREB1P16220 341 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 IBSPP21815 317 aaPredicted RBP21.09■□□□□ 0.97
HPS3-206ENST00000486530 DRD4P21917 467 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 PITX1P78337 314 aaPredicted RBP21.09■□□□□ 0.97
HPS3-206ENST00000486530 SLC10A2Q12908 348 aaPredicted RBP21.09■□□□□ 0.97
HPS3-206ENST00000486530 KLHL38Q2WGJ6 581 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 INTS6LQ5JSJ4 861 aaKnown RBP21.09■□□□□ 0.97
HPS3-206ENST00000486530 SYPL2Q5VXT5 272 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 TRAF7Q6Q0C0 670 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 HFE2Q6ZVN8 426 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 ZNF598Q86UK7 904 aaKnown RBP21.09■□□□□ 0.97
HPS3-206ENST00000486530 PALM2Q8IXS6 379 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 PYROXD2Q8N2H3 581 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 KCNK16Q96T55 309 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 MAGEB5Q9BZ81 275 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 KCNK9Q9NPC2 374 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 ETNK2Q9NVF9 386 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 RRN3Q9NYV6 651 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 SENP1Q9P0U3 644 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 PSMC3IPQ9P2W1 217 aaPredicted RBP21.09■□□□□ 0.97
HPS3-206ENST00000486530 RABGEF1Q9UJ41 708 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 NLRC5Q86WI3 1866 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 SF3B1O75533 1304 aaKnown RBP eCLIP21.09■□□□□ 0.97
HPS3-206ENST00000486530 HHLA1C9JL84 531 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 I3L4J1 428 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 CKBP12277 381 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 AMPD1P23109 780 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms