RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 SGK1O00141 431 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 LEFTY2O00292 366 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 TRIM66O15016 1216 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 CYP17A1P05093 508 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 ENGP17813 658 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 ACO1P21399 889 aaKnown RBP18.56■□□□□ 0.56
MCF2L-226ENST00000486210 GNL1P36915 607 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-226ENST00000486210 SLC6A11P48066 632 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 NDST1P52848 882 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 MRPS21P82921 87 aaKnown RBP18.56■□□□□ 0.56
MCF2L-226ENST00000486210 GCNT1Q02742 428 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 ORC1Q13415 861 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 ARMCX6Q7L4S7 300 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 TMEFF1Q8IYR6 380 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 SPATA17Q96L03 361 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 PCMTD1Q96MG8 357 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-226ENST00000486210 NAA15Q9BXJ9 866 aaKnown RBP18.56■□□□□ 0.56
MCF2L-226ENST00000486210 CISHQ9NSE2 258 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 TRPM5Q9NZQ8 1165 aa18.56■□□□□ 0.56
MCF2L-226ENST00000486210 PCDH15Q96QU1 1955 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 ATXN2Q99700 1313 aaKnown RBP18.55■□□□□ 0.56
MCF2L-226ENST00000486210 SPAARA0A1B0GVQ0 90 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 A0A1W2PQC6 194 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 TNFRSF10BO14763 440 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 ATP2C2O75185 946 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 UCHL3P15374 230 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 PFKLP17858 780 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 BDNFP23560 247 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 TBXAS1P24557 533 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-226ENST00000486210 MAPK8P45983 427 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 USP46P62068 366 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 INCA1Q0VD86 236 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 LMAN2Q12907 356 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 ARHGAP44Q17R89 818 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 DENND5BQ6ZUT9 1274 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 PIP4P1Q86T03 277 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 C12orf40Q86WS4 652 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 ADGRG2Q8IZP9 1017 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 ALLCQ8N6M5 410 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 IL17RCQ8NAC3 791 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 TXNDC5Q8NBS9 432 aaKnown RBP18.55■□□□□ 0.56
MCF2L-226ENST00000486210 ELOVL4Q9GZR5 314 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 MSRB2Q9Y3D2 182 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 GON4LQ3T8J9 2241 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 CACNA1EQ15878 2313 aa18.55■□□□□ 0.56
MCF2L-226ENST00000486210 MYO18AQ92614 2054 aaKnown RBP18.54■□□□□ 0.56
MCF2L-226ENST00000486210 A8MXQ7 604 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 CBFA2T2O43439 604 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 CILPO75339 1184 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 TIE1P35590 1138 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 KIR2DL1P43626 348 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-226ENST00000486210 MFAP3P55082 362 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 SEMA3BQ13214 749 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 MAP7D1Q3KQU3 841 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 ZNF394Q53GI3 561 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 EMC10Q5UCC4 262 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 PEAR1Q5VY43 1037 aaPredicted RBP18.54■□□□□ 0.56
MCF2L-226ENST00000486210 SLC23A3Q6PIS1 610 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 LPCAT2Q7L5N7 544 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 SYT12Q8IV01 421 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 MYCBPAPQ8TBZ2 947 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 NUSAP1Q9BXS6 441 aaKnown RBP18.54■□□□□ 0.56
MCF2L-226ENST00000486210 TRIM5Q9C035 493 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 RNF38Q9H0F5 515 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 ZDHHC4Q9NPG8 344 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 CRTAC1Q9NQ79 661 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 FSCN3Q9NQT6 498 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 LHX6Q9UPM6 363 aa18.54■□□□□ 0.56
MCF2L-226ENST00000486210 LAMA5O15230 3695 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 RNF225M0QZC1 329 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-226ENST00000486210 TAF4O00268 1085 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 KLF8O95600 359 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-226ENST00000486210 CALCAP01258 141 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 PNMA6AP0CW24 399 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-226ENST00000486210 PPP3CCP48454 512 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 POLR2FP61218 127 aaKnown RBP18.53■□□□□ 0.56
MCF2L-226ENST00000486210 DHCR24Q15392 516 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 MDH1BQ5I0G3 518 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 SLC32A1Q9H598 525 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 NLRC4Q9NPP4 1024 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 PCDHB4Q9Y5E5 795 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 DMXL2Q8TDJ6 3036 aa18.53■□□□□ 0.56
MCF2L-226ENST00000486210 ATP8B3O60423 1300 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 A0A0A0MRY4 1105 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 SCAMP3O14828 347 aaKnown RBP18.52■□□□□ 0.56
MCF2L-226ENST00000486210 ADAM23O75077 832 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 ALDH1A2O94788 518 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 KAT7O95251 611 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 OLFM2O95897 454 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 CAPNS1P04632 268 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 ITPKAP23677 461 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 ZNF75DP51815 510 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 RAD23BP54727 409 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 FAM193AP78312 1265 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 SIM1P81133 766 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-226ENST00000486210 RAPGEF1Q13905 1077 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 DRAP1Q14919 205 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-226ENST00000486210 RHBDF2Q6PJF5 856 aa18.52■□□□□ 0.56
MCF2L-226ENST00000486210 TMEM270Q6UE05 265 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms