RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TAF10Q12962 218 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 CLN3Q13286 438 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 PDCLQ13371 301 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 KCNC3Q14003 757 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 MTF1Q14872 753 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 COL19A1Q14993 1142 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 PTPN20Q4JDL3 420 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 PABPC1LQ4VXU2 614 aaKnown RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 ATAT1Q5SQI0 421 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 HGSNATQ68CP4 663 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 WDR59Q6PJI9 974 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 CYP26C1Q6V0L0 522 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 TRIM72Q6ZMU5 477 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 MMS22LQ6ZRQ5 1243 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 FAM183BPQ6ZVS7 135 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 GET4Q7L5D6 327 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 MSANTD4Q8NCY6 345 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 HDAC7Q8WUI4 952 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 SLC35F5Q8WV83 523 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 SYN2Q92777 582 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 C18orf8Q96DM3 657 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 TCEAL4Q96EI5 215 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 MCRS1Q96EZ8 462 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 PANX2Q96RD6 677 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 CPXM1Q96SM3 734 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 DNAJC7Q99615 494 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 BAG1Q99933 345 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 NACA2Q9H009 215 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 SLITRK6Q9H5Y7 841 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 NHEJ1Q9H9Q4 299 aaPredicted RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 CSNK1G1Q9HCP0 422 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 PCMTD2Q9NV79 361 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 ADAM22Q9P0K1 906 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 GMIPQ9P107 970 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 CD207Q9UJ71 328 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 NUDT5Q9UKK9 219 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 MAFFQ9ULX9 164 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 MRPS23Q9Y3D9 190 aaKnown RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 BZW2Q9Y6E2 419 aaKnown RBP5.91□□□□□ -1.46
COPS3-208ENST00000486032 PTPRDP23468 1912 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 COL4A3Q01955 1670 aa5.91□□□□□ -1.46
COPS3-208ENST00000486032 MYO16Q9Y6X6 1858 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 C2orf16Q68DN1 1984 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 A0A0C4DFX4 3053 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 SYNJ2BP-COX16A0A087WUM0 186 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 A0A087X0T9 212 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 A0A1W2PQH9 124 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 SSU72P8A0A1W2PR75 194 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 TNFRSF10BO14763 440 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 CAPN9O14815 690 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 MDM4O15151 490 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 NRDCO43847 1150 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 ZBED1O96006 694 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 FTLP02792 175 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 HNRNPA1P09651 372 aaKnown RBP eCLIP5.9□□□□□ -1.46
COPS3-208ENST00000486032 FAM228BP0C875 321 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 UNGP13051 313 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 HMGA1P17096 107 aaKnown RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 HOXB8P17481 243 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 CEBPBP17676 345 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 HOXA9P31269 272 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 HNRNPH3P31942 346 aaKnown RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 GBP2P32456 591 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 CCR2P41597 374 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 ACADSBP45954 432 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 SNX16P57768 344 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 CCDC173Q0VFZ6 552 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 CBX2Q14781 532 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 TEAD2Q15562 447 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 MEA1Q16626 185 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 QPCTQ16769 361 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 SLC5A9Q2M3M2 681 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 STXBP5Q5T5C0 1151 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 GPR158Q5T848 1215 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 FAM102AQ5T9C2 384 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 BTBD8Q5XKL5 378 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 TXNDC8Q6A555 127 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 ACAD10Q6JQN1 1059 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 ALKBH5Q6P6C2 394 aaKnown RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 RAD9BQ6WBX8 426 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 HFE2Q6ZVN8 426 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 RSRC2Q7L4I2 434 aaKnown RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 GPR149Q86SP6 731 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 TMTC1Q8IUR5 882 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 ACRBPQ8NEB7 543 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 ITFG1Q8TB96 612 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 KCTD13Q8WZ19 329 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 EDEM1Q92611 657 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 MRPS31Q92665 395 aaKnown RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 GOLGA1Q92805 767 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 PSMG2Q969U7 264 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 ZNF707Q96C28 371 aaPredicted RBP5.9□□□□□ -1.46
COPS3-208ENST00000486032 ZNF653Q96CK0 615 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 SPATA17Q96L03 361 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 HSFY1Q96LI6 401 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 RIPOR3Q96MK2 946 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 SLITRK1Q96PX8 696 aa5.9□□□□□ -1.46
COPS3-208ENST00000486032 DESI2Q9BSY9 194 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms