RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MMP8P22894 467 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 CORO1AP31146 461 aaKnown RBP12.36□□□□□ -0.43
HPS4-214ENST00000485842 GABRB2P47870 512 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 ZNF75DP51815 510 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 TBX4P57082 545 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 UBXN2BQ14CS0 331 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 TRIP4Q15650 581 aaPredicted RBP12.36□□□□□ -0.43
HPS4-214ENST00000485842 HTR3DQ70Z44 454 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 TAC4Q86UU9 113 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 ZDHHC17Q8IUH5 632 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 OLIG1Q8TAK6 271 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 SYN2Q92777 582 aaPredicted RBP12.36□□□□□ -0.43
HPS4-214ENST00000485842 SHDQ96IW2 340 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 SERPINB11Q96P15 392 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 SYT11Q9BT88 431 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 FOXQ1Q9C009 403 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 FAM204AQ9H8W3 233 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 METTL5Q9NRN9 209 aaKnown RBP12.36□□□□□ -0.43
HPS4-214ENST00000485842 ADAM22Q9P0K1 906 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 COX16Q9P0S2 106 aa12.36□□□□□ -0.43
HPS4-214ENST00000485842 HBS1LQ9Y450 684 aaKnown RBP12.36□□□□□ -0.43
HPS4-214ENST00000485842 SPECC1L-ADORA2AF8WAN1 911 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 GREM1O60565 184 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 GPR37L1O60883 481 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 KLKB1P03952 638 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 SERPING1P05155 500 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 PLEKP08567 350 aaPredicted RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 CTHP32929 405 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 VCPP55072 806 aaKnown RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 PITX1P78337 314 aaPredicted RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 CDK17Q00537 523 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 NR1H3Q13133 447 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 LY6G5CQ5SRR4 150 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 HGSNATQ68CP4 663 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 CWF19L1Q69YN2 538 aaKnown RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 Q6ZNB5 142 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 MON1BQ7L1V2 547 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 BEND5Q7L4P6 421 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 PHF13Q86YI8 300 aaPredicted RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 DENND1CQ8IV53 801 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 SUGP1Q8IWZ8 645 aaKnown RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 OTUB2Q96DC9 234 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 SLC2A13Q96QE2 648 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.35□□□□□ -0.43
HPS4-214ENST00000485842 DCLK3Q9C098 648 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 C8orf33Q9H7E9 229 aaPredicted RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 TAS2R14Q9NYV8 317 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 NDRG2Q9UN36 371 aaKnown RBP12.35□□□□□ -0.43
HPS4-214ENST00000485842 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
HPS4-214ENST00000485842 MYOFQ9NZM1 2061 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 KANSL1LA0AUZ9 987 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 PRR33A8MZF0 331 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 DDX3XO00571 662 aaKnown RBP eCLIP12.34□□□□□ -0.43
HPS4-214ENST00000485842 MAN2B1O00754 1011 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 IRAK2O43187 625 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 MFAP3LO75121 409 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 GJB6O95452 261 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 TRUB2O95900 331 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 ADH1CP00326 375 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 ADH5P11766 374 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 GJA4P35212 333 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 SCNN1AP37088 669 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 SULT1E1P49888 294 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 STARD6P59095 220 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 PTP4A2Q12974 167 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 DHCR24Q15392 516 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 ANO4Q32M45 955 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 TXNDC11Q6PKC3 985 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 ZNF852Q6ZMS4 543 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 TPGS1Q6ZTW0 290 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 VPS36Q86VN1 386 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 RALGPS2Q86X27 583 aaPredicted RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 FBXL6Q8N531 539 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 EMC1Q8N766 993 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 KIAA1958Q8N8K9 716 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 FAM3CQ92520 227 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 MRFAP1L1Q96HT8 127 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 LTB4R2Q9NPC1 389 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 DDIT4Q9NX09 232 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.34□□□□□ -0.43
HPS4-214ENST00000485842 AGO1Q9UL18 857 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 ZNF510Q9Y2H8 683 aa12.34□□□□□ -0.43
HPS4-214ENST00000485842 MRPS17Q9Y2R5 130 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 BZW2Q9Y6E2 419 aaKnown RBP12.34□□□□□ -0.43
HPS4-214ENST00000485842 TRIOO75962 3097 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 SHISA7A6NL88 538 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 AKR1B15C9JRZ8 316 aaPredicted RBP12.33□□□□□ -0.44
HPS4-214ENST00000485842 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
HPS4-214ENST00000485842 MOCS2O96007 188 aaPredicted RBP12.33□□□□□ -0.44
HPS4-214ENST00000485842 IGLV3-27P01718 113 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 APOEP02649 317 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 GLULP15104 373 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 TARSP26639 723 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms