RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 FAM90A18PA6NE21 464 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 FAM90A16PA6NEW6 464 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PRSS29PA6NIE9 313 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 FAM90A9PA6NNJ1 464 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 FAM90A5PA8MXJ8 464 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PSMA7O14818 248 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PLSCR1O15162 318 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PPP6R2O75170 966 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 TULP3O75386 442 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 SLC43A1O75387 559 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PGM3O95394 542 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 TGDSO95455 350 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 FAM90A15PP0C7V4 464 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 FAM90A14PP0C7W9 464 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 ATP5F1P24539 256 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 KLRK1P26718 216 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 KIF5BP33176 963 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 GRK5P34947 590 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 EIF2DP41214 584 aaKnown RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 IL13RA1P78552 427 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 RBP5P82980 135 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 CD83Q01151 205 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PPARDQ03181 441 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PTH1RQ03431 593 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 TBL3Q12788 808 aaKnown RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 TFCP2Q12800 502 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 AIMP1Q12904 312 aaKnown RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 BFSP1Q12934 665 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 TOP3AQ13472 1001 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 ATP1A4Q13733 1029 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 COG2Q14746 738 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 NPY5RQ15761 445 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 NFIL3Q16649 462 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 RNF151Q2KHN1 245 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 TCP11X2Q5H9J9 407 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF362Q5T0B9 420 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 CPLX2Q6PUV4 134 aaKnown RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 ZDHHC24Q6UX98 284 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 Q6ZSN1 163 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 IKBIPQ70UQ0 350 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 POLNQ7Z5Q5 900 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 SLFN11Q7Z7L1 901 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 USP37Q86T82 979 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 C17orf53Q8N3J3 647 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 ANKRD44Q8N8A2 993 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PIK3C3Q8NEB9 887 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 NLGN4YQ8NFZ3 816 aaPredicted RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 STON2Q8WXE9 905 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 RAPGEF4Q8WZA2 1011 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 STAMQ92783 540 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 SNX21Q969T3 373 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 MED15Q96RN5 788 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 SPATA5L1Q9BVQ7 753 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 NELFAQ9H3P2 528 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 SMARCAD1Q9H4L7 1026 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 UNKLQ9H9P5 680 aaKnown RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 TRPV4Q9HBA0 871 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 GPR35Q9HC97 309 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 WDR35Q9P2L0 1181 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 C11orf21Q9P2W6 132 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 DKK4Q9UBT3 224 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 SUFUQ9UMX1 484 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 OAZ3Q9UMX2 235 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 SLC30A1Q9Y6M5 507 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 INO80B-WBP1J3KQ70 363 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 UBE2CO00762 179 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 SH2B2O14492 632 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 TNPO2O14787 897 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 CPLX1O14810 134 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 NARSO43776 548 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 CDC14BO60729 498 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 ITGA10O75578 1167 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 CSPG5O95196 566 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 LARGE1O95461 756 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 GYPEP15421 78 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 NFKBIAP25963 317 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 EPHA8P29322 1005 aaPredicted RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 MCM7P33993 719 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 DPP6P42658 865 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 SATB1Q01826 763 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 UBXN1Q04323 297 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 DCTN2Q13561 401 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 PKN2Q16513 984 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 KYNUQ16719 465 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 PRICKLE4Q2TBC4 344 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 LSM12Q3MHD2 195 aaKnown RBP4.83□□□□□ -1.64
PTCD3-214ENST00000483925 PLEKHS1Q5SXH7 462 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 LIPMQ5VYY2 423 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 IGFL4Q6B9Z1 124 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 FCRL6Q6DN72 434 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 DGAT2L7PQ6IED9 249 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 RTL10Q7L3V2 364 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 RASGRP2Q7LDG7 609 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 CATSPER4Q7RTX7 472 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 UBE2Q1Q7Z7E8 422 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 GAS2L3Q86XJ1 694 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 EPHX4Q8IUS5 362 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 C1orf210Q8IVY1 113 aa4.83□□□□□ -1.64
PTCD3-214ENST00000483925 KIAA2013Q8IYS2 634 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms