RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 STIP1P31948 543 aaKnown RBP14.59□□□□□ -0.07
CLK3-204ENST00000483723 CXCR3P49682 368 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 ITGA8P53708 1063 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 CBX1P83916 185 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 RTP2Q5QGT7 225 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 HIBCHQ6NVY1 386 aaPredicted RBP14.59□□□□□ -0.07
CLK3-204ENST00000483723 NPNTQ6UXI9 565 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 RSPO2Q6UXX9 243 aaPredicted RBP14.59□□□□□ -0.07
CLK3-204ENST00000483723 ANKS3Q6ZW76 656 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 TAS1R1Q7RTX1 841 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 NECAB2Q7Z6G3 386 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 SCD5Q86SK9 330 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 SLC7A14Q8TBB6 771 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.59□□□□□ -0.07
CLK3-204ENST00000483723 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
CLK3-204ENST00000483723 CSPG4P5Q96PW8 444 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 FOXP3Q9BZS1 431 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 MCOLN1Q9GZU1 580 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 TSPYL1Q9H0U9 437 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 RC3H2Q9HBD1 1191 aaKnown RBP14.59□□□□□ -0.07
CLK3-204ENST00000483723 AAASQ9NRG9 546 aa14.59□□□□□ -0.07
CLK3-204ENST00000483723 ABI2Q9NYB9 513 aaPredicted RBP14.59□□□□□ -0.07
CLK3-204ENST00000483723 FAM92AA1XBS5 289 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 DNALI1O14645 258 aaPredicted RBP14.58□□□□□ -0.07
CLK3-204ENST00000483723 MCF2LO15068 1137 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 UPP2O95045 317 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 VNN2O95498 520 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 ZSCAN5DPP0CG00 497 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 RARGP13631 454 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 ETS1P14921 441 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 SEMA3BQ13214 749 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 XRCC4Q13426 336 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 SLMAPQ14BN4 828 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 PPP6R3Q5H9R7 873 aaPredicted RBP14.58□□□□□ -0.07
CLK3-204ENST00000483723 PRUNE1Q86TP1 453 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 UNC45BQ8IWX7 931 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 NUP93Q8N1F7 819 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 SPPL2BQ8TCT7 592 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 C2orf15Q8WU43 125 aaKnown RBP14.58□□□□□ -0.07
CLK3-204ENST00000483723 B3GALT6Q96L58 329 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 TTPALQ9BTX7 342 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 EPB41L4BQ9H329 900 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 USP29Q9HBJ7 922 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 ABCC13Q9NSE7 274 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 ANAPC5Q9UJX4 755 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 SCML2Q9UQR0 700 aa14.58□□□□□ -0.07
CLK3-204ENST00000483723 BCLAF3A2AJT9 711 aaKnown RBP14.58□□□□□ -0.08
CLK3-204ENST00000483723 I6L893 689 aaPredicted RBP14.58□□□□□ -0.08
CLK3-204ENST00000483723 SGK1O00141 431 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 NDC80O14777 642 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 OPA1O60313 960 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 EFCAB14O75071 495 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 PBX3P40426 434 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 HCAR3P49019 387 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 NR2C2P49116 596 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 ALDH7A1P49419 539 aaKnown RBP14.58□□□□□ -0.08
CLK3-204ENST00000483723 PMS2P54278 862 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 YWHAGP61981 247 aaKnown RBP eCLIP14.58□□□□□ -0.08
CLK3-204ENST00000483723 NME3Q13232 169 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 IZUMO3Q5VZ72 239 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 MFSD5Q6N075 450 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 SCN4BQ8IWT1 228 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 PYROXD2Q8N2H3 581 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 ATAD1Q8NBU5 361 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 DQX1Q8TE96 717 aaKnown RBP14.58□□□□□ -0.08
CLK3-204ENST00000483723 EDEM1Q92611 657 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 RTP4Q96DX8 246 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 IGSF21Q96ID5 467 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 PABPC3Q9H361 631 aaKnown RBP14.58□□□□□ -0.08
CLK3-204ENST00000483723 ANLNQ9NQW6 1124 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 TMEM51Q9NW97 253 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 COMMD8Q9NX08 183 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 ATP8A1Q9Y2Q0 1164 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 BACE2Q9Y5Z0 518 aa14.58□□□□□ -0.08
CLK3-204ENST00000483723 GREB1Q4ZG55 1949 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 MTMR11A4FU01 709 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 GOT1P17174 413 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 AMPD1P23109 780 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 RPL22P35268 128 aaKnown RBP14.57□□□□□ -0.08
CLK3-204ENST00000483723 ARL4AP40617 200 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 ZNF135P52742 658 aaPredicted RBP14.57□□□□□ -0.08
CLK3-204ENST00000483723 GDF10P55107 478 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 SLC10A2Q12908 348 aaPredicted RBP14.57□□□□□ -0.08
CLK3-204ENST00000483723 P3H1Q32P28 736 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 HSP90B2PQ58FF3 399 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 C1orf228Q6PIY5 440 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 MON1AQ86VX9 555 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 RELL1Q8IUW5 271 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 RSAD2Q8WXG1 361 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 SPATA17Q96L03 361 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 VN1R3Q9BXE9 311 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 FBXO44Q9H4M3 255 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 TMPRSS4Q9NRS4 437 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 DDIT4Q9NX09 232 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.57□□□□□ -0.08
CLK3-204ENST00000483723 MTRRQ9UBK8 725 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 TPX2Q9ULW0 747 aaKnown RBP14.57□□□□□ -0.08
CLK3-204ENST00000483723 PLAAQ9Y263 795 aa14.57□□□□□ -0.08
CLK3-204ENST00000483723 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.56□□□□□ -0.08
CLK3-204ENST00000483723 CFAP69A5D8W1 941 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms