RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 GNA14O95837 355 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 PENKP01210 267 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 RETP07949 1114 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 PNMA6AP0CW24 399 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 CNR2P34972 360 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 WASP42768 502 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 GPD2P43304 727 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 ID4P47928 161 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 RPL34P49207 117 aaKnown RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 SGSHP51688 502 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 MRPS21P82921 87 aaKnown RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 RSPO4Q2I0M5 234 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 PLK5Q496M5 336 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 HSP90AA4PQ58FG1 418 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 MIIPQ5JXC2 388 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 BSPRYQ5W0U4 402 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 ANO7Q6IWH7 933 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 TRIM65Q6PJ69 517 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 FAM217AQ8IXS0 508 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 ACDQ96AP0 544 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 MYEOVQ96EZ4 313 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 PIWIL1Q96J94 861 aaKnown RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 BBS2Q9BXC9 721 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 UBE2TQ9NPD8 197 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 CD93Q9NPY3 652 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 DNAJC17Q9NVM6 304 aaKnown RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 DLL3Q9NYJ7 618 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 MARCH2Q9P0N8 246 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 EBF1Q9UH73 591 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 NYNRINQ9P2P1 1898 aaKnown RBP12.65□□□□□ -0.38
HDLBP-239ENST00000483086 NUMA1Q14980 2115 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 A0A1W2PQF6 199 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 TBC1D3BA6NDS4 549 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 WASH3PC4AMC7 463 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 SETSIPP0DME0 302 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 RALAP11233 206 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 PON1P27169 355 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 TNFRSF4P43489 277 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 DGKEP52429 567 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 YWHAEP62258 255 aaKnown RBP12.64□□□□□ -0.39
HDLBP-239ENST00000483086 SF3A2Q15428 464 aaKnown RBP12.64□□□□□ -0.39
HDLBP-239ENST00000483086 TRIP4Q15650 581 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-239ENST00000483086 GEN1Q17RS7 908 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 KIAA1211LQ6NV74 962 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 CEP68Q76N32 757 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-239ENST00000483086 DENND1CQ8IV53 801 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 FMNL3Q8IVF7 1028 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 TSTD1Q8NFU3 115 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 OLIG1Q8TAK6 271 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 RLN3Q8WXF3 142 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 ZC3H10Q96K80 434 aaKnown RBP12.64□□□□□ -0.39
HDLBP-239ENST00000483086 ARRDC1-AS1Q9H2J1 176 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 LRRC4Q9HBW1 653 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 SEMA4GQ9NTN9 838 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 DEC1Q9P2X7 70 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 KIAA1257Q9ULG3 409 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 USP18Q9UMW8 372 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 STARD13Q9Y3M8 1113 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 ASPMQ8IZT6 3477 aa12.64□□□□□ -0.39
HDLBP-239ENST00000483086 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-239ENST00000483086 EPN2O95208 641 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 PITX1P78337 314 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-239ENST00000483086 PLA2G2CQ5R387 149 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 BTBD8Q5XKL5 378 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 TMEM215Q68D42 235 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 GRAMD4Q6IC98 578 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 TCEAL6Q6IPX3 200 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 CREBRFQ8IUR6 639 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 SCML4Q8N228 414 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 ZNF513Q8N8E2 541 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-239ENST00000483086 MLKLQ8NB16 471 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 ZNF606Q8WXB4 792 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 TCEAL3Q969E4 200 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 MIS12Q9H081 205 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 SLC6A17Q9H1V8 727 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 CNGB3Q9NQW8 809 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
HDLBP-239ENST00000483086 MBD1Q9UIS9 605 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-239ENST00000483086 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
HDLBP-239ENST00000483086 RAD54BQ9Y620 910 aa12.63□□□□□ -0.39
HDLBP-239ENST00000483086 GOLGA6L7A0A1B0GV03 622 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-239ENST00000483086 IGLV3-27P01718 113 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 KRT5P13647 590 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 MFAP3P55082 362 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 COG7P83436 770 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 KCNMA1Q12791 1236 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 TAF5Q15542 800 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 ARHGAP44Q17R89 818 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 NADSYN1Q6IA69 706 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 MSANTD2Q6P1R3 559 aa12.62□□□□□ -0.39
HDLBP-239ENST00000483086 PRR23CQ6ZRP0 262 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms