RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 METTL12A8MUP2 240 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 KCNJ18B7U540 433 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 BCAT2O15382 392 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 CYP26A1O43174 497 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 CILPO75339 1184 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 C4BPAP04003 597 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 ATXN1LP0C7T5 689 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 RARGP13631 454 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 ACO1P21399 889 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 ADORA2BP29275 332 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 CASP1P29466 404 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 TPMTP51580 245 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 NDST1P52848 882 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 BNC1Q01954 994 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 CUL4AQ13619 759 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 STK38Q15208 465 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 BMT2Q1RMZ1 405 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 SGSM1Q2NKQ1 1148 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 HLA-BQ31612 363 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 C10orf120Q5SQS8 335 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 DCAF12L1Q5VU92 463 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 GPRIN1Q7Z2K8 1008 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 METTL3Q86U44 580 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 MARCH9Q86YJ5 346 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 TMPRSS6Q8IU80 811 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 SPNS2Q8IVW8 549 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 CRYBG2Q8N1P7 616 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 CADM4Q8NFZ8 388 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 RHBDD1Q8TEB9 315 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 PARD3BQ8TEW8 1205 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 SIPA1Q96FS4 1042 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 P2RY11Q96G91 374 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 LRIG1Q96JA1 1093 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 C7orf25Q9BPX7 421 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 UPF2Q9HAU5 1272 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 NMUR1Q9HB89 426 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 SLC39A2Q9NP94 309 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 TM7SF3Q9NS93 570 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 FAM49BQ9NUQ9 324 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 KIAA1522Q9P206 1035 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 USP36Q9P275 1121 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 HMGXB4Q9UGU5 601 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 EIF2B4Q9UI10 523 aaKnown RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 SCML2Q9UQR0 700 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 RAXQ9Y2V3 346 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 MORC2Q9Y6X9 1032 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-206ENST00000483030 PTPRDP23468 1912 aa7.78□□□□□ -1.16
CSDE1-206ENST00000483030 A0A1B0GVT2 93 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 GOLGA8CPA6NN73 597 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 LRRIQ3A6PVS8 624 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 HHLA1C9JL84 531 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 SPTLC2O15270 562 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 SYNCRIPO60506 623 aaKnown RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 STC2O76061 302 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 VNN1O95497 513 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CER1O95813 267 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 KLKB1P03952 638 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 HMBSP08397 361 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 FAM200BP0CF97 657 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 ZNF883P0CG24 379 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 P4HA1P13674 534 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 OXTRP30559 389 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 MATKP42679 507 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 IL12RB1P42701 662 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 NASPP49321 788 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 AP3M2P53677 418 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 MFAP3P55082 362 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CLDN10P78369 228 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 EHHADHQ08426 723 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CYP4F3Q08477 520 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 GEN1Q17RS7 908 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 KNOP1Q1ED39 458 aaKnown RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CNNM4Q6P4Q7 775 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 KLHDC10Q6PID8 442 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 Q6ZNB5 142 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CLEC20AQ6ZU45 233 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 UNC13DQ70J99 1090 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 TMPRSS7Q7RTY8 843 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 SCD5Q86SK9 330 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 C12orf56Q8IXR9 622 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 IQUBQ8NA54 791 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 LINC00301Q8NCQ3 95 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 PRCCQ92733 491 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CYFIP2Q96F07 1278 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 HNRNPABQ99729 332 aaKnown RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 NUP58Q9BVL2 599 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 BLZF1Q9H2G9 400 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CUEDC2Q9H467 287 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 CGNQ9P2M7 1197 aaKnown RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 THAP10Q9P2Z0 257 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 TFIP11Q9UBB9 837 aaKnown RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 NAGPAQ9UK23 515 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 FNDC3AQ9Y2H6 1198 aaKnown RBP7.77□□□□□ -1.17
CSDE1-206ENST00000483030 SLC27A6Q9Y2P4 619 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 NFE2L3Q9Y4A8 694 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 MYOFQ9NZM1 2061 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 UBE4BO95155 1302 aa7.77□□□□□ -1.17
CSDE1-206ENST00000483030 PI4KAP42356 2102 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms